Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.05□□□□□ -2.08
Hmgb3O54879 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.05□□□□□ -2.08
Hmgb3O54879 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.05□□□□□ -2.08
Hmgb3O54879 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Hmgb3O54879 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Hmgb3O54879 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Hmgb3O54879 Gm25810-201ENSMUST00000082752 108 ntBASIC2.05□□□□□ -2.08
Hmgb3O54879 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Hmgb3O54879 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Hmgb3O54879 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.05□□□□□ -2.08
Hmgb3O54879 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Hmgb3O54879 Gm25647-201ENSMUST00000101832 78 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm25823-201ENSMUST00000101995 78 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Mir667-201ENSMUST00000102441 92 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm26075-201ENSMUST00000104062 121 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm14894-201ENSMUST00000117170 270 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm2288-201ENSMUST00000118560 638 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm13678-201ENSMUST00000118926 340 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm13080-201ENSMUST00000120556 420 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm12383-201ENSMUST00000120628 760 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm15466-201ENSMUST00000122299 333 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.04□□□□□ -2.08
Hmgb3O54879 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.04□□□□□ -2.08
Hmgb3O54879 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm24220-201ENSMUST00000177753 79 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm25988-201ENSMUST00000177759 79 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm23471-201ENSMUST00000177886 79 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm26488-201ENSMUST00000178225 79 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm25598-201ENSMUST00000179031 107 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm23449-201ENSMUST00000179208 79 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm25221-201ENSMUST00000180051 79 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm37449-201ENSMUST00000193016 270 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm37807-201ENSMUST00000194310 190 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm18658-201ENSMUST00000195558 270 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.04□□□□□ -2.08
Hmgb3O54879 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm5373-201ENSMUST00000212113 1050 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Hmgb3O54879 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Hmgb3O54879 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Hmgb3O54879 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.04□□□□□ -2.08
Hmgb3O54879 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Hmgb3O54879 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
Hmgb3O54879 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm1989-201ENSMUST00000126244 636 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm22322-201ENSMUST00000157151 111 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm25427-201ENSMUST00000157605 103 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm24745-201ENSMUST00000157840 85 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm16289-201ENSMUST00000162079 183 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm21816-201ENSMUST00000179255 360 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm28169-201ENSMUST00000190342 345 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm38018-201ENSMUST00000195651 540 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm9632-201ENSMUST00000195934 643 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm45678-201ENSMUST00000210509 295 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Hmgb3O54879 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.03□□□□□ -2.08
Hmgb3O54879 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Hmgb3O54879 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Hmgb3O54879 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Hmgb3O54879 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Hmgb3O54879 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Hmgb3O54879 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Hmgb3O54879 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm12238-201ENSMUST00000127764 124 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm25280-201ENSMUST00000157269 101 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm22947-201ENSMUST00000158559 91 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm17186-201ENSMUST00000171742 456 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm26701-201ENSMUST00000181571 234 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
Hmgb3O54879 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm29330-201ENSMUST00000190032 699 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm19498-201ENSMUST00000191128 331 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm28098-201ENSMUST00000191361 699 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.02□□□□□ -2.09
Hmgb3O54879 Gm44118-201ENSMUST00000204665 229 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 142 ms