Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm44477-201ENSMUST00000199661 110 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Gm18327-201ENSMUST00000202426 830 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Gm7726-201ENSMUST00000206241 231 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Sdc4O35988 Gm45742-201ENSMUST00000212400 433 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 AL662807.1-201ENSMUST00000224183 126 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Sdc4O35988 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Sdc4O35988 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Sdc4O35988 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Sdc4O35988 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Sdc4O35988 Gm42736-201ENSMUST00000200723 1353 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Sdc4O35988 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sdc4O35988 Gm23551-201ENSMUST00000116852 121 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Gm8569-201ENSMUST00000117630 647 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.39□□□□□ -2.03
Sdc4O35988 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Gm29045-201ENSMUST00000187278 698 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Trbv27-201ENSMUST00000193711 277 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Gm43316-201ENSMUST00000197252 1295 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Gm43669-201ENSMUST00000198229 436 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Gm18602-201ENSMUST00000209794 851 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Sdc4O35988 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.39□□□□□ -2.03
Sdc4O35988 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Sdc4O35988 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Sdc4O35988 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Sdc4O35988 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Sdc4O35988 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Sdc4O35988 Gm22345-201ENSMUST00000122644 107 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.38□□□□□ -2.03
Sdc4O35988 Gm22257-201ENSMUST00000158687 301 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Sdc4O35988 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Sdc4O35988 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Sdc4O35988 Mir6353-201ENSMUST00000183596 113 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Mir6238-201ENSMUST00000184140 129 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm28399-201ENSMUST00000186221 318 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm28572-201ENSMUST00000187444 318 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm29365-201ENSMUST00000189461 699 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm29525-201ENSMUST00000189844 699 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm29524-201ENSMUST00000190819 699 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm29523-201ENSMUST00000191415 699 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm43626-201ENSMUST00000198575 162 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Gm6012-201ENSMUST00000210821 730 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Sdc4O35988 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Sdc4O35988 Gm25628-201ENSMUST00000084002 105 ntBASIC2.38□□□□□ -2.03
Sdc4O35988 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
Sdc4O35988 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Sdc4O35988 Gm7123-201ENSMUST00000117647 213 ntBASIC2.37□□□□□ -2.03
Sdc4O35988 Gm15147-201ENSMUST00000122263 483 ntBASIC2.37□□□□□ -2.03
Sdc4O35988 Gm22794-201ENSMUST00000157228 306 ntBASIC2.37□□□□□ -2.03
Sdc4O35988 Gm26099-201ENSMUST00000157248 109 ntBASIC2.37□□□□□ -2.03
Sdc4O35988 Gm23441-201ENSMUST00000157268 127 ntBASIC2.37□□□□□ -2.03
Sdc4O35988 Gm22227-201ENSMUST00000157356 259 ntBASIC2.37□□□□□ -2.03
Sdc4O35988 Gm22666-201ENSMUST00000158717 164 ntBASIC2.37□□□□□ -2.03
Sdc4O35988 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Sdc4O35988 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Sdc4O35988 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC2.37□□□□□ -2.03
Sdc4O35988 Gm19252-201ENSMUST00000204705 305 ntBASIC2.37□□□□□ -2.03
Sdc4O35988 Gm44844-201ENSMUST00000207242 336 ntBASIC2.37□□□□□ -2.03
Sdc4O35988 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.37□□□□□ -2.03
Sdc4O35988 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.37□□□□□ -2.03
Sdc4O35988 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.37□□□□□ -2.03
Sdc4O35988 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Sdc4O35988 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Sdc4O35988 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Sdc4O35988 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
Sdc4O35988 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Sdc4O35988 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Sdc4O35988 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Sdc4O35988 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm23472-201ENSMUST00000101806 191 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm12401-201ENSMUST00000118435 228 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm13751-201ENSMUST00000120280 752 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm12617-201ENSMUST00000121268 381 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm15536-201ENSMUST00000121411 114 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm12956-201ENSMUST00000122184 414 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm24475-201ENSMUST00000157435 143 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm3104-201ENSMUST00000171004 473 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm24497-201ENSMUST00000177868 191 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm25939-201ENSMUST00000179876 191 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm26622-201ENSMUST00000180520 298 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Mir8118-201ENSMUST00000183962 129 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.36□□□□□ -2.03
Sdc4O35988 Gm18406-201ENSMUST00000185872 669 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms