Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Mir27a-201ENSMUST00000083510 87 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Clk3O35492 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Clk3O35492 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Clk3O35492 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Clk3O35492 Mir294-201ENSMUST00000104710 84 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Clk3O35492 Gm14751-201ENSMUST00000117693 222 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm12640-201ENSMUST00000120097 310 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm22204-201ENSMUST00000122654 327 ntBASIC3.58□□□□□ -1.84
Clk3O35492 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.58□□□□□ -1.84
Clk3O35492 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.58□□□□□ -1.84
Clk3O35492 Gm25163-201ENSMUST00000158905 104 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm17119-201ENSMUST00000163943 280 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Mir1251-201ENSMUST00000175486 84 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm10067-201ENSMUST00000179462 348 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm25156-201ENSMUST00000179809 79 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm27580-201ENSMUST00000183666 149 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm27828-201ENSMUST00000184108 119 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Mir6899-201ENSMUST00000184798 64 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm5116-201ENSMUST00000187732 463 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm29627-201ENSMUST00000187984 463 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.58□□□□□ -1.84
Clk3O35492 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.58□□□□□ -1.84
Clk3O35492 Gm42622-201ENSMUST00000197229 355 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm44818-201ENSMUST00000206608 358 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm44650-201ENSMUST00000206929 194 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm19126-201ENSMUST00000207896 509 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm44910-201ENSMUST00000208451 396 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Clk3O35492 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Clk3O35492 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Clk3O35492 Gm7099-201ENSMUST00000080066 554 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm26165-201ENSMUST00000083791 138 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Clk3O35492 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Clk3O35492 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.58□□□□□ -1.84
Clk3O35492 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Clk3O35492 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Clk3O35492 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Clk3O35492 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Clk3O35492 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Clk3O35492 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Clk3O35492 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm15151-201ENSMUST00000117106 177 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm14537-201ENSMUST00000117464 599 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm13728-201ENSMUST00000117471 400 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm13268-201ENSMUST00000117485 433 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm15443-201ENSMUST00000118947 820 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm13804-201ENSMUST00000119552 172 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm11645-201ENSMUST00000121589 649 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm14768-201ENSMUST00000122126 678 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm6568-201ENSMUST00000122274 697 ntBASIC3.57□□□□□ -1.84
Clk3O35492 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Clk3O35492 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Clk3O35492 Gm22597-201ENSMUST00000157602 80 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm24901-201ENSMUST00000158125 110 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm24976-201ENSMUST00000158972 135 ntBASIC3.57□□□□□ -1.84
Clk3O35492 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Clk3O35492 Gm17538-201ENSMUST00000168236 327 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.57□□□□□ -1.84
Clk3O35492 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Clk3O35492 Gm37757-201ENSMUST00000193072 210 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.57□□□□□ -1.84
Clk3O35492 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.57□□□□□ -1.84
Clk3O35492 Gm17906-201ENSMUST00000202480 901 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Clk3O35492 Gm18540-201ENSMUST00000204025 526 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.57□□□□□ -1.84
Clk3O35492 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Clk3O35492 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.57□□□□□ -1.84
Clk3O35492 Gm30674-201ENSMUST00000214523 392 ntBASIC3.57□□□□□ -1.84
Clk3O35492 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Clk3O35492 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Clk3O35492 Gm17829-201ENSMUST00000219782 344 ntBASIC3.57□□□□□ -1.84
Clk3O35492 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.57□□□□□ -1.84
Clk3O35492 Gm19441-201ENSMUST00000221545 330 ntBASIC3.57□□□□□ -1.84
Clk3O35492 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.57□□□□□ -1.84
Clk3O35492 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.57□□□□□ -1.84
Clk3O35492 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.57□□□□□ -1.84
Clk3O35492 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Clk3O35492 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Clk3O35492 Gm10042-201ENSMUST00000079884 78 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Clk3O35492 Gm22304-201ENSMUST00000082688 129 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm22508-201ENSMUST00000082772 110 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm22229-201ENSMUST00000082987 108 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Gm25200-201ENSMUST00000083094 130 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Mir30e-201ENSMUST00000083475 92 ntBASIC3.57□□□□□ -1.84
Clk3O35492 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Clk3O35492 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Clk3O35492 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Clk3O35492 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.57□□□□□ -1.84
Clk3O35492 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms