Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm16331-201ENSMUST00000144274 498 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm24780-201ENSMUST00000157635 143 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Scn1aA2APX8 Gm16147-201ENSMUST00000162143 373 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm27220-201ENSMUST00000183453 262 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.56□□□□□ -2
Scn1aA2APX8 Mir8103-201ENSMUST00000183945 107 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm38214-201ENSMUST00000192581 988 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm37993-201ENSMUST00000195301 988 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm42828-201ENSMUST00000199669 469 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.56□□□□□ -2
Scn1aA2APX8 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.56□□□□□ -2
Scn1aA2APX8 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn1aA2APX8 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.56□□□□□ -2
Scn1aA2APX8 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn1aA2APX8 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn1aA2APX8 Gm23847-201ENSMUST00000083829 110 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn1aA2APX8 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn1aA2APX8 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.55□□□□□ -2
Scn1aA2APX8 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.55□□□□□ -2
Scn1aA2APX8 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn1aA2APX8 Gm22782-201ENSMUST00000104082 132 ntBASIC2.55□□□□□ -2
Scn1aA2APX8 Gm14125-201ENSMUST00000113442 680 ntBASIC2.55□□□□□ -2
Scn1aA2APX8 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.55□□□□□ -2
Scn1aA2APX8 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.55□□□□□ -2
Scn1aA2APX8 Gm22693-201ENSMUST00000175049 442 ntBASIC2.55□□□□□ -2
Scn1aA2APX8 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC2.55□□□□□ -2
Scn1aA2APX8 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.55□□□□□ -2
Scn1aA2APX8 AC156952.1-201ENSMUST00000220361 793 ntBASIC2.55□□□□□ -2
Scn1aA2APX8 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.55□□□□□ -2
Scn1aA2APX8 AC099612.2-201ENSMUST00000226824 721 ntBASIC2.55□□□□□ -2
Scn1aA2APX8 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.55□□□□□ -2
Scn1aA2APX8 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn1aA2APX8 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Scn1aA2APX8 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Scn1aA2APX8 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Scn1aA2APX8 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scn1aA2APX8 Gm3940-201ENSMUST00000105087 432 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm12495-201ENSMUST00000119750 447 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm13676-201ENSMUST00000122185 591 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm23234-201ENSMUST00000157304 134 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm24061-201ENSMUST00000157489 120 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scn1aA2APX8 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.54□□□□□ -2
Scn1aA2APX8 Gm22252-201ENSMUST00000179316 79 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm28155-201ENSMUST00000191066 151 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm3010-201ENSMUST00000198805 448 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm42976-201ENSMUST00000200313 222 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC2.54□□□□□ -2
Scn1aA2APX8 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm8274-201ENSMUST00000219820 463 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC2.54□□□□□ -2
Scn1aA2APX8 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn1aA2APX8 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scn1aA2APX8 Gm6030-201ENSMUST00000078768 402 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scn1aA2APX8 Gm13340-201ENSMUST00000117219 1545 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Scn1aA2APX8 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm12509-201ENSMUST00000118033 609 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm4732-201ENSMUST00000118778 473 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn1aA2APX8 Gm24210-201ENSMUST00000158263 133 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm28637-201ENSMUST00000179424 345 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm27522-201ENSMUST00000183949 230 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm43440-201ENSMUST00000201957 729 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm44256-201ENSMUST00000203304 335 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.54□□□□□ -2
Scn1aA2APX8 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Scn1aA2APX8 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.54□□□□□ -2
Scn1aA2APX8 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn1aA2APX8 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn1aA2APX8 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn1aA2APX8 Gm6215-201ENSMUST00000119297 1386 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn1aA2APX8 Gm26341-201ENSMUST00000104561 134 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Gm15951-201ENSMUST00000118377 400 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Gm12881-201ENSMUST00000121191 203 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Gm25866-201ENSMUST00000158245 112 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Gm18354-201ENSMUST00000173515 1068 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Gm25642-201ENSMUST00000175137 66 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Gm7094-201ENSMUST00000178379 366 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Gm25944-201ENSMUST00000178758 94 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Gm26622-201ENSMUST00000180520 298 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Scn1aA2APX8 Gm44059-201ENSMUST00000204048 351 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scn1aA2APX8 Gm44615-201ENSMUST00000206548 358 ntBASIC2.53□□□□□ -2
Scn1aA2APX8 Gm18598-201ENSMUST00000207724 597 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms