Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm42818-201ENSMUST00000198869 987 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm43899-201ENSMUST00000203675 246 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm20948-201ENSMUST00000211091 449 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 AC132384.5-201ENSMUST00000218562 226 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm7119-201ENSMUST00000221345 695 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 AC166369.1-201ENSMUST00000228126 351 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm2710-201ENSMUST00000073196 603 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm7853-201ENSMUST00000100708 478 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm16171-201ENSMUST00000118004 324 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm11268-201ENSMUST00000118347 267 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm13085-201ENSMUST00000118356 171 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm14841-201ENSMUST00000121067 758 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm24936-201ENSMUST00000122598 247 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm26101-201ENSMUST00000157246 105 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm23754-201ENSMUST00000157576 63 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm20698-201ENSMUST00000175657 233 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Mir8103-201ENSMUST00000183945 107 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm7870-201ENSMUST00000184467 616 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Mir6371-201ENSMUST00000184470 111 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm27942-201ENSMUST00000184669 101 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm28534-201ENSMUST00000187744 676 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm37213-201ENSMUST00000193077 586 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm5983-201ENSMUST00000197739 770 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm19147-201ENSMUST00000199622 652 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm15235-201ENSMUST00000200572 194 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm45395-201ENSMUST00000209891 559 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.11□□□□□ -2.07
Trav11A0A0B4J1J9 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Mir542-201ENSMUST00000102186 85 ntBASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm24855-201ENSMUST00000104848 97 ntBASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm13761-201ENSMUST00000117238 807 ntBASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm26477-201ENSMUST00000122617 323 ntBASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm16354-201ENSMUST00000155376 150 ntBASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm22059-201ENSMUST00000157544 104 ntBASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Mir5129-201ENSMUST00000174938 78 ntBASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm25476-201ENSMUST00000175125 185 ntBASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm28779-201ENSMUST00000189678 323 ntBASIC2.1□□□□□ -2.07
Trav11A0A0B4J1J9 Gm29288-201ENSMUST00000191582 901 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 110.8 ms