Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm19987-201ENSMUST00000216339 499 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm12213-201ENSMUST00000119924 353 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14238-201ENSMUST00000120227 323 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm16445-201ENSMUST00000120399 714 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14982-201ENSMUST00000121102 442 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm13901-201ENSMUST00000137252 468 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm16533-201ENSMUST00000140035 228 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm26088-201ENSMUST00000157896 131 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm23895-201ENSMUST00000158108 160 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm6900-201ENSMUST00000178971 342 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm26297-201ENSMUST00000179464 132 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Mir6408-201ENSMUST00000183643 91 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm27608-201ENSMUST00000184822 162 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm27700-201ENSMUST00000185003 81 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm19257-201ENSMUST00000186121 183 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm3489-201ENSMUST00000190083 528 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm38281-201ENSMUST00000192301 315 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm43070-201ENSMUST00000196938 415 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm45192-201ENSMUST00000206749 283 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm44954-201ENSMUST00000208513 227 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 AC164883.9-201ENSMUST00000228042 399 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm9765-201ENSMUST00000043170 321 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm25126-201ENSMUST00000083343 102 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.28□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.28□□□□□ -2.05
Trbv1A0A0B4J1G7 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Mir706-201ENSMUST00000102262 84 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm24118-201ENSMUST00000103972 126 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm24119-201ENSMUST00000103979 246 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm26341-201ENSMUST00000104561 134 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm8569-201ENSMUST00000117630 647 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm15176-201ENSMUST00000117734 135 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm13082-201ENSMUST00000118877 561 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm14881-201ENSMUST00000120366 372 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm14564-201ENSMUST00000122159 294 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm24840-201ENSMUST00000122603 147 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm4916-201ENSMUST00000126139 642 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm14368-201ENSMUST00000145305 415 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm22186-201ENSMUST00000157822 122 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm24314-201ENSMUST00000158274 123 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Mir5136-201ENSMUST00000175573 76 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm26061-201ENSMUST00000175584 108 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm29740-201ENSMUST00000193182 655 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm37288-201ENSMUST00000193963 334 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm45696-201ENSMUST00000212088 985 ntBASIC2.27□□□□□ -2.05
Trbv1A0A0B4J1G7 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms