Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm25120-201ENSMUST00000180148 79 ntBASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Gm43142-201ENSMUST00000198670 361 ntBASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Gm44030-201ENSMUST00000204865 432 ntBASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Gm44208-201ENSMUST00000205199 421 ntBASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.6□□□□□ -1.99
Trav8n-2A0A075B633 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm25466-201ENSMUST00000103995 132 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm12782-201ENSMUST00000117519 727 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm15193-201ENSMUST00000120224 865 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 DQ267100-201ENSMUST00000122600 72 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm24922-201ENSMUST00000158511 102 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm42976-201ENSMUST00000200313 222 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm18598-201ENSMUST00000207724 597 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm6842-201ENSMUST00000211361 390 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm45551-201ENSMUST00000211459 928 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm7422-201ENSMUST00000220115 640 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm5655-201ENSMUST00000221078 901 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 LOC667541-201ENSMUST00000223408 278 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.59□□□□□ -1.99
Trav8n-2A0A075B633 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Trav8n-2A0A075B633 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.59□□□□□ -2
Trav8n-2A0A075B633 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Trav8n-2A0A075B633 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.59□□□□□ -2
Trav8n-2A0A075B633 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Mir693-201ENSMUST00000102187 89 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm14593-201ENSMUST00000119948 294 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm22026-201ENSMUST00000122735 281 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm23716-201ENSMUST00000157348 144 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm24291-201ENSMUST00000157633 162 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm24240-201ENSMUST00000157785 135 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm25902-201ENSMUST00000158493 318 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm25707-201ENSMUST00000175120 96 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm20660-201ENSMUST00000177515 289 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm27921-201ENSMUST00000183968 108 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm19498-201ENSMUST00000191128 331 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm38075-201ENSMUST00000191979 920 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm37523-201ENSMUST00000194901 412 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm45588-201ENSMUST00000211213 630 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm18043-201ENSMUST00000216741 739 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Platr25-208ENSMUST00000222602 939 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Gm22622-201ENSMUST00000082870 129 ntBASIC2.58□□□□□ -2
Trav8n-2A0A075B633 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav8n-2A0A075B633 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav8n-2A0A075B633 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.57□□□□□ -2
Trav8n-2A0A075B633 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav8n-2A0A075B633 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.57□□□□□ -2
Trav8n-2A0A075B633 Gm12881-201ENSMUST00000121191 203 ntBASIC2.57□□□□□ -2
Trav8n-2A0A075B633 Gm16218-201ENSMUST00000155424 388 ntBASIC2.57□□□□□ -2
Trav8n-2A0A075B633 Gm22664-201ENSMUST00000158719 105 ntBASIC2.57□□□□□ -2
Trav8n-2A0A075B633 Gm7346-201ENSMUST00000169661 476 ntBASIC2.57□□□□□ -2
Trav8n-2A0A075B633 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav8n-2A0A075B633 Gm24969-201ENSMUST00000180331 79 ntBASIC2.57□□□□□ -2
Trav8n-2A0A075B633 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms