Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm11281-201ENSMUST00000141391 576 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm25666-201ENSMUST00000157702 107 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm26460-201ENSMUST00000175061 126 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm23152-201ENSMUST00000175322 116 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm24968-201ENSMUST00000179817 107 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Mir7056-201ENSMUST00000183776 59 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm27690-201ENSMUST00000184596 126 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm27564-201ENSMUST00000185196 96 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm38044-201ENSMUST00000192964 487 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm42594-201ENSMUST00000199511 246 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm44011-201ENSMUST00000203336 394 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm18791-201ENSMUST00000204611 726 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Mir181a-2-201ENSMUST00000083489 76 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb3S4R1G7 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
H2afb3S4R1G7 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
H2afb3S4R1G7 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.65□□□□□ -1.82
H2afb3S4R1G7 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.65□□□□□ -1.82
H2afb3S4R1G7 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
H2afb3S4R1G7 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
H2afb3S4R1G7 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
H2afb3S4R1G7 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
H2afb3S4R1G7 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
H2afb3S4R1G7 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
H2afb3S4R1G7 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm25560-201ENSMUST00000104606 176 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm12568-201ENSMUST00000117362 624 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm5379-201ENSMUST00000120973 826 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm23167-201ENSMUST00000157155 103 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm26468-201ENSMUST00000158644 106 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm22633-201ENSMUST00000179834 107 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm37743-201ENSMUST00000194645 376 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm43723-201ENSMUST00000196886 189 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm44468-201ENSMUST00000199516 105 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm43407-201ENSMUST00000199816 317 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm44032-201ENSMUST00000204841 166 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm45438-201ENSMUST00000210242 564 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm45375-201ENSMUST00000210338 280 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm8785-201ENSMUST00000220259 487 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm20102-201ENSMUST00000222445 220 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm22350-201ENSMUST00000083924 156 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm22365-201ENSMUST00000093750 117 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm37761-201ENSMUST00000194989 2098 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm42536-201ENSMUST00000197562 1613 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
H2afb3S4R1G7 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Gm42528-201ENSMUST00000200697 3418 ntBASIC3.64□□□□□ -1.83
H2afb3S4R1G7 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Gm14883-201ENSMUST00000120179 157 ntBASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Gm24385-201ENSMUST00000122694 350 ntBASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Gm26320-201ENSMUST00000157742 306 ntBASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Gm23068-201ENSMUST00000158239 293 ntBASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC3.64□□□□□ -1.83
H2afb3S4R1G7 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms