Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm28847-201ENSMUST00000186778 700 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm29365-201ENSMUST00000189461 699 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm19774-201ENSMUST00000190667 114 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm37727-201ENSMUST00000191637 819 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm29950-201ENSMUST00000195273 237 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm45380-201ENSMUST00000210465 315 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm45327-201ENSMUST00000211612 565 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm45778-201ENSMUST00000211959 153 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm35405-201ENSMUST00000218754 400 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 LOC667541-201ENSMUST00000223408 278 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm24490-201ENSMUST00000083803 98 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Mir592-201ENSMUST00000102113 96 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm24273-201ENSMUST00000102332 164 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm24671-201ENSMUST00000104159 158 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm22072-201ENSMUST00000116850 121 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm13167-201ENSMUST00000118554 578 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm12954-201ENSMUST00000118610 611 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm14835-201ENSMUST00000119039 315 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm5762-201ENSMUST00000119204 258 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm11357-201ENSMUST00000119758 954 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm6587-201ENSMUST00000120219 613 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm12095-201ENSMUST00000121962 816 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm12755-201ENSMUST00000122297 282 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm23885-201ENSMUST00000122682 294 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm25341-201ENSMUST00000157461 268 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm23312-201ENSMUST00000158774 102 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm28010-201ENSMUST00000179485 126 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm26988-201ENSMUST00000183296 945 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm43556-201ENSMUST00000196186 681 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm43115-201ENSMUST00000196244 160 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm43232-201ENSMUST00000201346 364 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm44125-201ENSMUST00000203068 448 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm44650-201ENSMUST00000206929 194 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm7380-201ENSMUST00000211599 466 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm18015-201ENSMUST00000214879 316 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 AC164297.5-201ENSMUST00000224365 198 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm26128-201ENSMUST00000083170 110 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
H2afb1S4R1E0 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm25213-201ENSMUST00000102388 113 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm26418-201ENSMUST00000104275 137 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm12697-201ENSMUST00000118008 667 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm14566-201ENSMUST00000118915 321 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm25318-201ENSMUST00000122554 314 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm23540-201ENSMUST00000157543 164 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm24532-201ENSMUST00000157951 286 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm9593-201ENSMUST00000166034 469 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm27163-201ENSMUST00000184767 409 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm31123-201ENSMUST00000192094 666 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm38076-201ENSMUST00000193889 450 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm37617-201ENSMUST00000194309 159 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm18429-201ENSMUST00000198707 421 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm43407-201ENSMUST00000199816 317 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms