Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Mir6417-201ENSMUST00000183815 116 ntBASIC5.12□□□□□ -1.59
Nubp1Q9R060 Gm28976-201ENSMUST00000188070 144 ntBASIC5.12□□□□□ -1.59
Nubp1Q9R060 Gm29650-201ENSMUST00000188485 742 ntBASIC5.12□□□□□ -1.59
Nubp1Q9R060 Gm37361-201ENSMUST00000194345 132 ntBASIC5.12□□□□□ -1.59
Nubp1Q9R060 Gm18341-201ENSMUST00000197538 622 ntBASIC5.12□□□□□ -1.59
Nubp1Q9R060 Gm45907-201ENSMUST00000213023 193 ntBASIC5.12□□□□□ -1.59
Nubp1Q9R060 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.12□□□□□ -1.59
Nubp1Q9R060 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nubp1Q9R060 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nubp1Q9R060 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nubp1Q9R060 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Nubp1Q9R060 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.12□□□□□ -1.59
Nubp1Q9R060 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nubp1Q9R060 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.12□□□□□ -1.59
Nubp1Q9R060 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.12□□□□□ -1.59
Nubp1Q9R060 Gm38240-201ENSMUST00000195110 2487 ntBASIC5.12□□□□□ -1.59
Nubp1Q9R060 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Nubp1Q9R060 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nubp1Q9R060 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm22778-201ENSMUST00000104090 128 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm13193-201ENSMUST00000117275 225 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm12074-201ENSMUST00000120189 219 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm26106-201ENSMUST00000157254 228 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm23584-201ENSMUST00000157655 129 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm23642-201ENSMUST00000157858 258 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm22384-201ENSMUST00000158187 104 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm26172-201ENSMUST00000158421 134 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm22531-201ENSMUST00000158819 140 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm17166-201ENSMUST00000172006 431 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Mir6963-201ENSMUST00000183535 71 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm29610-201ENSMUST00000187749 453 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm29597-201ENSMUST00000188035 308 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm1833-201ENSMUST00000191608 682 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm44030-201ENSMUST00000204865 432 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm2614-201ENSMUST00000223227 403 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 AC154213.2-201ENSMUST00000227138 187 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.11□□□□□ -1.59
Nubp1Q9R060 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.11□□□□□ -1.59
Nubp1Q9R060 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm25537-201ENSMUST00000103851 109 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm13604-201ENSMUST00000119332 482 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm23233-201ENSMUST00000157301 137 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Mir1967-201ENSMUST00000157789 82 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm43744-201ENSMUST00000196387 688 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm19060-201ENSMUST00000201959 421 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm45553-201ENSMUST00000209929 507 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm45778-201ENSMUST00000211959 153 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm5750-201ENSMUST00000218711 801 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 AC100209.2-201ENSMUST00000224461 451 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 AC160550.3-201ENSMUST00000226818 400 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm25813-201ENSMUST00000082748 191 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm24950-201ENSMUST00000082768 191 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm23971-201ENSMUST00000083317 191 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm23849-201ENSMUST00000083833 191 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm26316-201ENSMUST00000083886 191 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Rnu2-10-201ENSMUST00000084010 191 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms