Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 CT030704.1-201ENSMUST00000227521 699 ntBASIC1.76□□□□□ -2.13
Six6Q9QZ28 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Six6Q9QZ28 Gm10025-201ENSMUST00000079568 372 ntBASIC1.76□□□□□ -2.13
Six6Q9QZ28 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Six6Q9QZ28 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Six6Q9QZ28 Gm26247-201ENSMUST00000116702 91 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 Gm24831-201ENSMUST00000116778 126 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 Gm13273-201ENSMUST00000119737 159 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 Gm23867-201ENSMUST00000122649 274 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Six6Q9QZ28 Gm7909-201ENSMUST00000182688 614 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 Mir6541-201ENSMUST00000183649 110 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 Gm27921-201ENSMUST00000183968 108 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 Mir6238-201ENSMUST00000184140 129 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 Mir6401-201ENSMUST00000184499 109 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Six6Q9QZ28 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC1.75□□□□□ -2.13
Six6Q9QZ28 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.75□□□□□ -2.13
Six6Q9QZ28 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC1.75□□□□□ -2.13
Six6Q9QZ28 AC158536.1-201ENSMUST00000222510 256 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Six6Q9QZ28 Gm24611-201ENSMUST00000083272 107 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Six6Q9QZ28 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Six6Q9QZ28 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.75□□□□□ -2.13
Six6Q9QZ28 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Six6Q9QZ28 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Six6Q9QZ28 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC1.74□□□□□ -2.13
Six6Q9QZ28 Gm17161-201ENSMUST00000169187 524 ntBASIC1.74□□□□□ -2.13
Six6Q9QZ28 Gm20773-201ENSMUST00000178940 681 ntBASIC1.74□□□□□ -2.13
Six6Q9QZ28 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC1.74□□□□□ -2.13
Six6Q9QZ28 Trbv18-201ENSMUST00000194256 294 ntBASIC1.74□□□□□ -2.13
Six6Q9QZ28 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.74□□□□□ -2.13
Six6Q9QZ28 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Six6Q9QZ28 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC1.74□□□□□ -2.13
Six6Q9QZ28 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Six6Q9QZ28 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC1.74□□□□□ -2.13
Six6Q9QZ28 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Six6Q9QZ28 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Six6Q9QZ28 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC1.74□□□□□ -2.13
Six6Q9QZ28 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Six6Q9QZ28 Gm7675-201ENSMUST00000208828 686 ntBASIC1.74□□□□□ -2.13
Six6Q9QZ28 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC1.74□□□□□ -2.13
Six6Q9QZ28 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Six6Q9QZ28 Gm22970-201ENSMUST00000083304 186 ntBASIC1.74□□□□□ -2.13
Six6Q9QZ28 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Six6Q9QZ28 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Six6Q9QZ28 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Six6Q9QZ28 Gm14125-201ENSMUST00000113442 680 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Gm15103-201ENSMUST00000119893 871 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC1.73□□□□□ -2.13
Six6Q9QZ28 Gm23167-201ENSMUST00000157155 103 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Mir3104-201ENSMUST00000174911 63 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Gm25476-201ENSMUST00000175125 185 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Gm24813-201ENSMUST00000175310 84 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Gm6113-201ENSMUST00000180319 639 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Mir6374-201ENSMUST00000184003 107 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Mir6950-201ENSMUST00000184438 73 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Six6Q9QZ28 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC1.73□□□□□ -2.13
Six6Q9QZ28 AL590503.1-201ENSMUST00000222053 321 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 CT030705.1-201ENSMUST00000223971 533 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 AC159188.1-201ENSMUST00000225198 526 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Gm23615-201ENSMUST00000082602 65 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Gm22622-201ENSMUST00000082870 129 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Snord14d-201ENSMUST00000083424 86 ntBASIC1.73□□□□□ -2.13
Six6Q9QZ28 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Six6Q9QZ28 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Six6Q9QZ28 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Six6Q9QZ28 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Six6Q9QZ28 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.72□□□□□ -2.13
Six6Q9QZ28 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
Six6Q9QZ28 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Six6Q9QZ28 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.72□□□□□ -2.13
Six6Q9QZ28 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm15025-201ENSMUST00000118434 418 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm23886-201ENSMUST00000122684 313 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm22517-201ENSMUST00000158265 136 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm23005-201ENSMUST00000158950 136 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC1.72□□□□□ -2.13
Six6Q9QZ28 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Six6Q9QZ28 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm23053-201ENSMUST00000175136 96 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm21147-201ENSMUST00000186046 913 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm28113-201ENSMUST00000188280 229 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm19641-201ENSMUST00000188432 417 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm42828-201ENSMUST00000199669 469 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm45452-201ENSMUST00000210905 177 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm18228-201ENSMUST00000217297 1091 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm18899-201ENSMUST00000217663 546 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
Six6Q9QZ28 Gm30534-201ENSMUST00000217928 207 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 AC154527.5-201ENSMUST00000224448 496 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 AC154600.1-201ENSMUST00000226480 714 ntBASIC1.72□□□□□ -2.13
Six6Q9QZ28 CT030662.1-201ENSMUST00000227380 232 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms