Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm25105-201ENSMUST00000122477 130 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm6900-201ENSMUST00000178971 342 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm27330-201ENSMUST00000184689 132 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm18667-201ENSMUST00000186523 484 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm28615-201ENSMUST00000187527 482 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm29408-201ENSMUST00000187536 216 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm7449-201ENSMUST00000194393 663 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm19147-201ENSMUST00000199622 652 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.76□□□□□ -1.97
Trem1Q9JKE2 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm46193-201ENSMUST00000219399 364 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm4945-201ENSMUST00000075152 453 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm25480-201ENSMUST00000083217 133 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm23104-201ENSMUST00000083722 104 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm10704-201ENSMUST00000098952 730 ntBASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trem1Q9JKE2 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trem1Q9JKE2 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Mir542-201ENSMUST00000102186 85 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm16354-201ENSMUST00000155376 150 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm24213-201ENSMUST00000158255 258 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm22910-201ENSMUST00000178568 132 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm27392-201ENSMUST00000185041 101 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm18597-201ENSMUST00000209519 694 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm45912-201ENSMUST00000210646 543 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm25199-201ENSMUST00000083095 104 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm22740-201ENSMUST00000083439 109 ntBASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trem1Q9JKE2 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 AC161254.1-201ENSMUST00000220310 3842 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm25213-201ENSMUST00000102388 113 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm14448-201ENSMUST00000116383 210 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Defa-ps9-201ENSMUST00000118264 276 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm22986-201ENSMUST00000122753 130 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm22560-201ENSMUST00000157332 120 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm23380-201ENSMUST00000158448 103 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm23190-201ENSMUST00000180307 64 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm26585-201ENSMUST00000180890 630 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm10292-201ENSMUST00000183142 581 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm28785-201ENSMUST00000187478 379 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm37213-201ENSMUST00000193077 586 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm20948-201ENSMUST00000211091 449 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm19987-201ENSMUST00000216339 499 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm6030-201ENSMUST00000078768 402 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm23136-201ENSMUST00000083425 99 ntBASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms