Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm26108-201ENSMUST00000083973 191 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm14428-201ENSMUST00000120408 822 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm22380-201ENSMUST00000157479 95 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm24211-201ENSMUST00000158264 107 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm22769-201ENSMUST00000158367 98 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm24498-201ENSMUST00000158445 102 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Mir496b-201ENSMUST00000184935 113 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm43487-201ENSMUST00000200331 1031 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm44274-201ENSMUST00000203417 256 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm44923-201ENSMUST00000206673 85 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm45614-201ENSMUST00000209994 721 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm21007-201ENSMUST00000221024 326 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim54Q9ERP3 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm23063-201ENSMUST00000102350 93 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm25507-201ENSMUST00000116981 144 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm15377-201ENSMUST00000119594 246 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm6373-201ENSMUST00000121026 360 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm23753-201ENSMUST00000157575 149 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm23666-201ENSMUST00000158053 116 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm16101-201ENSMUST00000160695 430 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm26141-201ENSMUST00000175299 126 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm20689-201ENSMUST00000176033 279 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm25670-201ENSMUST00000178423 107 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm26239-201ENSMUST00000178842 107 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm24267-201ENSMUST00000179841 107 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm27718-201ENSMUST00000183721 86 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Trbv8-201ENSMUST00000194020 285 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm46994-201ENSMUST00000221523 219 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm5955-201ENSMUST00000222712 219 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 CT010480.1-201ENSMUST00000223612 363 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm24292-201ENSMUST00000082888 107 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim54Q9ERP3 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Trim54Q9ERP3 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms