Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm23615-201ENSMUST00000082602 65 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 AC124746.1-201ENSMUST00000227535 1300 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm14579-201ENSMUST00000117068 283 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm14897-201ENSMUST00000118213 207 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm12095-201ENSMUST00000121962 816 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 DQ267100-201ENSMUST00000122600 72 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm20811-201ENSMUST00000190500 553 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm9696-202ENSMUST00000191541 830 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC2.63□□□□□ -1.99
Lima1Q9ERG0 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Gm26458-201ENSMUST00000082832 128 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.63□□□□□ -1.99
Lima1Q9ERG0 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Lima1Q9ERG0 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Gm23577-201ENSMUST00000103950 110 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Gm22658-201ENSMUST00000104196 155 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Gm26473-201ENSMUST00000116763 127 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Gm9541-201ENSMUST00000188409 502 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Gm10925-201ENSMUST00000189941 678 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Gm6140-201ENSMUST00000192494 966 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Gm18645-202ENSMUST00000212222 760 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Lima1Q9ERG0 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Snora36b-201ENSMUST00000104383 132 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm15125-201ENSMUST00000116185 800 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm15488-201ENSMUST00000121682 670 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm22478-201ENSMUST00000122570 154 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm24240-201ENSMUST00000157785 135 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm16236-201ENSMUST00000159588 379 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm28113-201ENSMUST00000188280 229 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Npn2-202ENSMUST00000189275 235 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm43669-201ENSMUST00000198229 436 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm43930-201ENSMUST00000203868 845 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm6012-201ENSMUST00000210821 730 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm45400-201ENSMUST00000211603 653 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm30534-201ENSMUST00000217928 207 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Gm24446-201ENSMUST00000083982 156 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Lima1Q9ERG0 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.61□□□□□ -1.99
Lima1Q9ERG0 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm22497-201ENSMUST00000104499 131 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm9432-201ENSMUST00000117810 759 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm13678-201ENSMUST00000118926 340 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm25107-201ENSMUST00000122472 129 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm22141-201ENSMUST00000157403 277 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm8161-201ENSMUST00000168739 481 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm9587-201ENSMUST00000172449 454 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms