Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm24008-201ENSMUST00000157733 138 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm23084-201ENSMUST00000157850 114 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm21726-201ENSMUST00000179654 392 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm29229-201ENSMUST00000188874 323 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm36934-201ENSMUST00000192007 306 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm37239-201ENSMUST00000193510 141 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm43217-201ENSMUST00000199513 367 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm32381-201ENSMUST00000203192 476 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm32536-201ENSMUST00000205209 445 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 AC124346.1-201ENSMUST00000218539 364 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 AC124489.2-201ENSMUST00000223930 589 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.05□□□□□ -1.6
Upf1Q9EPU0 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC5.05□□□□□ -1.6
Upf1Q9EPU0 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm381-201ENSMUST00000117443 2037 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm23747-201ENSMUST00000104228 131 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm14627-201ENSMUST00000118931 567 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm13273-201ENSMUST00000119737 159 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm23411-201ENSMUST00000157988 62 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm25861-201ENSMUST00000158251 109 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm23852-201ENSMUST00000158376 77 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm16318-201ENSMUST00000162402 601 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm23003-201ENSMUST00000179948 107 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm37568-201ENSMUST00000191755 364 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Mir6375-201ENSMUST00000197176 95 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 AC127270.2-201ENSMUST00000221337 247 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm26055-201ENSMUST00000083038 107 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Gm5670-201ENSMUST00000093546 372 ntBASIC5.04□□□□□ -1.6
Upf1Q9EPU0 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf1Q9EPU0 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm7853-201ENSMUST00000100708 478 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm22750-201ENSMUST00000102076 103 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm26156-201ENSMUST00000116999 123 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm12803-201ENSMUST00000118907 821 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm13228-201ENSMUST00000118937 634 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm22480-201ENSMUST00000122568 128 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm25106-201ENSMUST00000122672 134 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm6265-201ENSMUST00000149263 231 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm23540-201ENSMUST00000157543 164 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm25671-201ENSMUST00000178612 105 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm23307-201ENSMUST00000179167 105 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm25286-201ENSMUST00000179790 105 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm28008-201ENSMUST00000184021 186 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm42458-201ENSMUST00000201914 369 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm2522-201ENSMUST00000204280 322 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm45080-201ENSMUST00000206648 283 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 AC091783.5-201ENSMUST00000224928 671 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 AF357428-201ENSMUST00000083815 69 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms