Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.66□□□□□ -1.82
Vps28Q9D1C8 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.66□□□□□ -1.82
Vps28Q9D1C8 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.66□□□□□ -1.82
Vps28Q9D1C8 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
Vps28Q9D1C8 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Vps28Q9D1C8 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Vps28Q9D1C8 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Vps28Q9D1C8 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Vps28Q9D1C8 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Vps28Q9D1C8 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Vps28Q9D1C8 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm25563-201ENSMUST00000104603 74 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm26474-201ENSMUST00000116762 122 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm22091-201ENSMUST00000116908 127 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm14751-201ENSMUST00000117693 222 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm13122-201ENSMUST00000118380 453 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm12458-201ENSMUST00000119387 495 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm11357-201ENSMUST00000119758 954 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm14240-201ENSMUST00000120353 546 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm23118-201ENSMUST00000122657 187 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm25902-201ENSMUST00000158493 318 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Mir6541-201ENSMUST00000183649 110 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm27760-201ENSMUST00000185048 114 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm43704-201ENSMUST00000196164 496 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm43652-201ENSMUST00000196219 675 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm9379-201ENSMUST00000196790 646 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Gm23925-201ENSMUST00000082471 132 ntBASIC3.65□□□□□ -1.83
Vps28Q9D1C8 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Vps28Q9D1C8 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm25764-201ENSMUST00000104092 134 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm14570-201ENSMUST00000119444 391 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm25667-201ENSMUST00000157701 275 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm23053-201ENSMUST00000175136 96 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm20612-201ENSMUST00000176318 236 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm38044-201ENSMUST00000192964 487 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm35876-201ENSMUST00000205044 459 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm44266-201ENSMUST00000205235 500 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm45438-201ENSMUST00000210242 564 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm45400-201ENSMUST00000211603 653 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Gm9068-201ENSMUST00000217393 455 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 AC111046.1-201ENSMUST00000217715 412 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Snora7a-201ENSMUST00000082629 140 ntBASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Vps28Q9D1C8 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Vps28Q9D1C8 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Gm7123-201ENSMUST00000117647 213 ntBASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Gm24534-201ENSMUST00000157949 291 ntBASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Gm26141-201ENSMUST00000175299 126 ntBASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Gm25451-201ENSMUST00000177832 121 ntBASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Mir6383-201ENSMUST00000184545 116 ntBASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Vps28Q9D1C8 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Gm2189-201ENSMUST00000201419 429 ntBASIC3.63□□□□□ -1.83
Vps28Q9D1C8 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms