Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm29408-201ENSMUST00000187536 216 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm37337-201ENSMUST00000192601 993 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm45553-201ENSMUST00000209929 507 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm6929-201ENSMUST00000210930 468 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm22810-201ENSMUST00000082741 158 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Mir690-201ENSMUST00000102110 109 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm24544-201ENSMUST00000103862 110 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm24671-201ENSMUST00000104159 158 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm25169-201ENSMUST00000104190 129 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm11693-201ENSMUST00000119625 565 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm7308-201ENSMUST00000121087 447 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm12755-201ENSMUST00000122297 282 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm25294-201ENSMUST00000122791 104 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm23716-201ENSMUST00000157348 144 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm25369-201ENSMUST00000158848 132 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm23816-201ENSMUST00000179617 132 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm18775-201ENSMUST00000190763 586 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm43652-201ENSMUST00000196219 675 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm19649-201ENSMUST00000201126 822 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Gm8423-201ENSMUST00000211387 607 ntBASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ddx28Q9CWT6 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm25088-201ENSMUST00000101803 79 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm25420-201ENSMUST00000104216 127 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm11490-201ENSMUST00000118128 272 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm12640-201ENSMUST00000120097 310 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm14739-201ENSMUST00000120424 802 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm24905-201ENSMUST00000158129 104 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm22890-201ENSMUST00000158642 144 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm28030-201ENSMUST00000184987 138 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm6947-201ENSMUST00000186254 78 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm43489-201ENSMUST00000196810 993 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ddx28Q9CWT6 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.34□□□□□ -1.88
Ddx28Q9CWT6 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.34□□□□□ -1.88
Ddx28Q9CWT6 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.34□□□□□ -1.88
Ddx28Q9CWT6 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.34□□□□□ -1.88
Ddx28Q9CWT6 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms