Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Gm19641-201ENSMUST00000188432 417 ntBASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Gm37979-201ENSMUST00000193065 712 ntBASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Gm19126-201ENSMUST00000207896 509 ntBASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Gm45588-201ENSMUST00000211213 630 ntBASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Gm9370-201ENSMUST00000222787 609 ntBASIC3.54□□□□□ -1.84
Smc1aQ9CU62 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.54□□□□□ -1.84
Smc1aQ9CU62 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Gm26129-201ENSMUST00000082719 107 ntBASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Gm4017-201ENSMUST00000084813 338 ntBASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Gm21286-201ENSMUST00000098035 545 ntBASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Smc1aQ9CU62 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Gm2348-201ENSMUST00000108782 300 ntBASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Gm3788-201ENSMUST00000119949 136 ntBASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Gm24840-201ENSMUST00000122603 147 ntBASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Gm28002-201ENSMUST00000184832 100 ntBASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Smc1aQ9CU62 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
Smc1aQ9CU62 Gm7171-201ENSMUST00000177413 1349 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm23886-201ENSMUST00000122684 313 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm3123-201ENSMUST00000163480 480 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm26988-201ENSMUST00000183296 945 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm27921-201ENSMUST00000183968 108 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm7870-201ENSMUST00000184467 616 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm27163-201ENSMUST00000184767 409 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm33571-201ENSMUST00000193271 657 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm44393-201ENSMUST00000197418 138 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm43228-201ENSMUST00000200735 264 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm44720-201ENSMUST00000206076 260 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm22507-201ENSMUST00000082773 160 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm23104-201ENSMUST00000083722 104 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.52□□□□□ -1.85
Smc1aQ9CU62 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm25539-201ENSMUST00000116886 122 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm11576-201ENSMUST00000117433 417 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm15025-201ENSMUST00000118434 418 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm14363-201ENSMUST00000122304 409 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm8840-201ENSMUST00000122454 386 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm13901-201ENSMUST00000137252 468 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm24080-201ENSMUST00000175178 232 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm28390-201ENSMUST00000185212 700 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Trav12-4-201ENSMUST00000200663 271 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Smc1aQ9CU62 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms