Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm24914-201ENSMUST00000157285 313 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm28002-201ENSMUST00000184832 100 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Mir6372-201ENSMUST00000185114 109 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm19540-201ENSMUST00000221843 810 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Mir101b-201ENSMUST00000083622 97 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Gm12458-201ENSMUST00000119387 495 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Gm13627-201ENSMUST00000119700 706 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Gm24534-201ENSMUST00000157949 291 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Mir6907-201ENSMUST00000183764 71 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Gm29754-201ENSMUST00000206269 358 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Gm18729-201ENSMUST00000217230 621 ntBASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ccdc43Q9CR29 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Mir1198-201ENSMUST00000116995 121 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm26100-201ENSMUST00000157245 127 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm22722-201ENSMUST00000157467 132 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm24008-201ENSMUST00000157733 138 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm22833-201ENSMUST00000158292 132 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm28688-201ENSMUST00000187301 268 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm45192-201ENSMUST00000206749 283 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm44718-201ENSMUST00000206886 359 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm25008-201ENSMUST00000083809 81 ntBASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Ccdc43Q9CR29 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Gm13751-201ENSMUST00000120280 752 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Gm25292-201ENSMUST00000122797 322 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Gm23034-201ENSMUST00000158001 147 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Mir8096-201ENSMUST00000184526 127 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Gm18551-201ENSMUST00000195594 642 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Gm45439-201ENSMUST00000211723 359 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Gm25856-201ENSMUST00000082786 75 ntBASIC3.51□□□□□ -1.85
Ccdc43Q9CR29 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms