Protein–RNA interactions for Protein: Q99J79

Ddb2, DNA damage-binding protein 2, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb2Q99J79 Gm12235-201ENSMUST00000118596 170 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm25325-201ENSMUST00000122559 86 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm23743-201ENSMUST00000157389 274 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm24784-201ENSMUST00000157640 62 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm24504-201ENSMUST00000157679 100 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm23047-201ENSMUST00000177661 94 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm13249-201ENSMUST00000177803 345 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm13144-201ENSMUST00000179385 345 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm27233-201ENSMUST00000184030 307 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm28629-201ENSMUST00000187309 263 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.8□□□□□ -1.8
Ddb2Q99J79 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ddb2Q99J79 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ddb2Q99J79 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm9309-201ENSMUST00000223537 546 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm23510-201ENSMUST00000083083 163 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ddb2Q99J79 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Ddb2Q99J79 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ddb2Q99J79 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.8□□□□□ -1.8
Ddb2Q99J79 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC3.8□□□□□ -1.8
Ddb2Q99J79 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ddb2Q99J79 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Ddb2Q99J79 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ddb2Q99J79 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Ddb2Q99J79 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Ddb2Q99J79 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ddb2Q99J79 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ddb2Q99J79 Mir667-201ENSMUST00000102441 92 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm14304-201ENSMUST00000117272 446 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm12568-201ENSMUST00000117362 624 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm11698-201ENSMUST00000117948 455 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm11577-201ENSMUST00000118030 737 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm12509-201ENSMUST00000118033 609 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm12924-201ENSMUST00000121747 318 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm24780-201ENSMUST00000157635 143 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Mir1947-201ENSMUST00000158235 85 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm20923-201ENSMUST00000190009 319 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm18320-201ENSMUST00000211304 595 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ddb2Q99J79 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
Ddb2Q99J79 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ddb2Q99J79 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.79□□□□□ -1.8
Ddb2Q99J79 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Ddb2Q99J79 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm26367-201ENSMUST00000104165 132 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm14628-201ENSMUST00000117508 635 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm7219-201ENSMUST00000119619 297 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm12486-201ENSMUST00000120887 541 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm11430-201ENSMUST00000121317 217 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm8200-201ENSMUST00000122390 222 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm22514-201ENSMUST00000122547 308 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm25806-201ENSMUST00000122782 122 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm10444-201ENSMUST00000126708 148 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm25184-201ENSMUST00000157753 163 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm26426-201ENSMUST00000177866 123 ntBASIC3.78□□□□□ -1.8
Ddb2Q99J79 Gm26060-201ENSMUST00000180094 123 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms