Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.03□□□□□ -2.08
Nup35Q8R4R6 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.03□□□□□ -2.08
Nup35Q8R4R6 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Nup35Q8R4R6 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Nup35Q8R4R6 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Nup35Q8R4R6 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Nup35Q8R4R6 Gm9174-201ENSMUST00000078149 255 ntBASIC2.03□□□□□ -2.08
Nup35Q8R4R6 Gm25199-201ENSMUST00000083095 104 ntBASIC2.03□□□□□ -2.08
Nup35Q8R4R6 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Nup35Q8R4R6 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.03□□□□□ -2.08
Nup35Q8R4R6 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Mir673-201ENSMUST00000102361 91 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm12383-201ENSMUST00000120628 760 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm12876-201ENSMUST00000120975 408 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm13913-201ENSMUST00000121126 260 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm22957-201ENSMUST00000122511 123 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm23168-201ENSMUST00000157156 143 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm22277-201ENSMUST00000157204 277 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Nron-204ENSMUST00000158971 370 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm5929-201ENSMUST00000166883 487 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm27155-201ENSMUST00000183716 898 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Mir6907-201ENSMUST00000183764 71 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm29524-201ENSMUST00000190819 699 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm29523-201ENSMUST00000191415 699 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm44476-201ENSMUST00000196225 91 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm24350-202ENSMUST00000198309 132 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Nup35Q8R4R6 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.02□□□□□ -2.09
Nup35Q8R4R6 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Mir667-201ENSMUST00000102441 92 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm22019-201ENSMUST00000104359 96 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm12392-201ENSMUST00000118014 938 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm13678-201ENSMUST00000118926 340 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm22947-201ENSMUST00000158559 91 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm17204-201ENSMUST00000167936 478 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm27220-201ENSMUST00000183453 262 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm27582-201ENSMUST00000184084 126 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Mir3069-201ENSMUST00000198802 65 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm43992-201ENSMUST00000204358 197 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm9370-201ENSMUST00000222787 609 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.01□□□□□ -2.09
Nup35Q8R4R6 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm23846-201ENSMUST00000083835 107 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.01□□□□□ -2.09
Nup35Q8R4R6 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2□□□□□ -2.09
Nup35Q8R4R6 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Nup35Q8R4R6 Gm14429-201ENSMUST00000121881 2024 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Gm42482-201ENSMUST00000198904 1947 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Gm25308-201ENSMUST00000104171 158 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Gm23128-201ENSMUST00000104257 132 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2□□□□□ -2.09
Nup35Q8R4R6 Gm23642-201ENSMUST00000157858 258 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Gm24212-201ENSMUST00000158258 132 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Nup35Q8R4R6 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Gm3852-201ENSMUST00000182781 264 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Mir6975-201ENSMUST00000184879 61 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Gm3933-201ENSMUST00000195391 439 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2□□□□□ -2.09
Nup35Q8R4R6 Gm23128-202ENSMUST00000196578 133 ntBASIC2□□□□□ -2.09
Nup35Q8R4R6 Gm34314-201ENSMUST00000203622 367 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms