Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc28aQ8CEI3 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm16100-201ENSMUST00000120489 231 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm14841-201ENSMUST00000121067 758 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm13913-201ENSMUST00000121126 260 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm11344-201ENSMUST00000122011 335 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm25945-201ENSMUST00000122484 135 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Mir7028-201ENSMUST00000185016 64 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm29534-201ENSMUST00000187328 382 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm10925-201ENSMUST00000189941 678 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm43264-201ENSMUST00000202284 325 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.56□□□□□ -2
Ccdc28aQ8CEI3 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm25526-201ENSMUST00000104332 132 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm22023-201ENSMUST00000104354 130 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm16400-201ENSMUST00000116523 1029 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm14973-201ENSMUST00000117248 255 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm23792-201ENSMUST00000122557 93 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm23887-201ENSMUST00000122683 172 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm24532-201ENSMUST00000157951 286 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm24210-201ENSMUST00000158263 133 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm24771-201ENSMUST00000158508 137 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Mir6401-201ENSMUST00000184499 109 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm43295-201ENSMUST00000201439 412 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm44520-201ENSMUST00000205447 802 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 n-R5s86-201ENSMUST00000083215 119 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.55□□□□□ -2
Ccdc28aQ8CEI3 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Mir542-201ENSMUST00000102186 85 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm13862-201ENSMUST00000121220 197 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm14564-201ENSMUST00000122159 294 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm25107-201ENSMUST00000122472 129 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm23642-201ENSMUST00000157858 258 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm17065-201ENSMUST00000165245 239 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm20673-201ENSMUST00000177167 430 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm27220-201ENSMUST00000183453 262 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm42593-201ENSMUST00000198469 377 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm18645-202ENSMUST00000212222 760 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm19540-201ENSMUST00000221843 810 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.54□□□□□ -2
Ccdc28aQ8CEI3 Gm14069-201ENSMUST00000120815 229 ntBASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 Gm25292-201ENSMUST00000122797 322 ntBASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 Gm25979-201ENSMUST00000157177 138 ntBASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 Gm22563-201ENSMUST00000157333 269 ntBASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 Gm20534-201ENSMUST00000172957 172 ntBASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 Gm28623-201ENSMUST00000187219 192 ntBASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 Mir3069-201ENSMUST00000198802 65 ntBASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 Gm44274-201ENSMUST00000203417 256 ntBASIC2.53□□□□□ -2
Ccdc28aQ8CEI3 Gm44399-201ENSMUST00000205043 226 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms