Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Sh3rf2Q8BZT2 Gm26056-201ENSMUST00000083043 104 ntBASIC3.96□□□□□ -1.78
Sh3rf2Q8BZT2 Mir30e-201ENSMUST00000083475 92 ntBASIC3.96□□□□□ -1.78
Sh3rf2Q8BZT2 Gm23733-201ENSMUST00000083750 106 ntBASIC3.96□□□□□ -1.78
Sh3rf2Q8BZT2 Gm16261-201ENSMUST00000096813 205 ntBASIC3.96□□□□□ -1.78
Sh3rf2Q8BZT2 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.96□□□□□ -1.78
Sh3rf2Q8BZT2 Gm38269-201ENSMUST00000194549 3298 ntBASIC3.96□□□□□ -1.78
Sh3rf2Q8BZT2 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Sh3rf2Q8BZT2 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.96□□□□□ -1.78
Sh3rf2Q8BZT2 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.96□□□□□ -1.78
Sh3rf2Q8BZT2 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
Sh3rf2Q8BZT2 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm26273-201ENSMUST00000104180 131 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm15142-201ENSMUST00000121013 856 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm22059-201ENSMUST00000157544 104 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm23124-201ENSMUST00000157650 107 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm24898-201ENSMUST00000158133 106 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm17538-201ENSMUST00000168236 327 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm27161-201ENSMUST00000183960 562 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm27660-201ENSMUST00000184028 208 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm27640-201ENSMUST00000184580 147 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm28390-201ENSMUST00000185212 700 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm17781-201ENSMUST00000195232 649 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm22572-201ENSMUST00000082985 105 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Snord38a-201ENSMUST00000083746 71 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm3867-201ENSMUST00000086108 279 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Olfr713-201ENSMUST00000098139 975 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Sh3rf2Q8BZT2 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm15268-201ENSMUST00000118845 352 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm2005-201ENSMUST00000120759 542 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm22208-201ENSMUST00000122658 110 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm25365-201ENSMUST00000158852 121 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm20415-201ENSMUST00000172877 423 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm14527-201ENSMUST00000179300 639 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm24306-201ENSMUST00000180229 79 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm27189-201ENSMUST00000184119 190 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Mir6385-201ENSMUST00000184295 105 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm28500-201ENSMUST00000190286 151 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm29334-201ENSMUST00000190334 357 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm43814-201ENSMUST00000197851 413 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm42758-201ENSMUST00000202146 283 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Mir28a-201ENSMUST00000083560 86 ntBASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sh3rf2Q8BZT2 Gm37761-201ENSMUST00000194989 2098 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms