Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm24769-201ENSMUST00000158506 129 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm23583-201ENSMUST00000158533 289 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.15□□□□□ -1.9
Usp47Q8BY87 Mir8118-201ENSMUST00000183962 129 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm43494-201ENSMUST00000197672 388 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm43083-201ENSMUST00000199594 476 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm44083-201ENSMUST00000203114 337 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm8274-201ENSMUST00000219820 463 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Usp47Q8BY87 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Usp47Q8BY87 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Usp47Q8BY87 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Usp47Q8BY87 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.14□□□□□ -1.91
Usp47Q8BY87 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm26280-201ENSMUST00000157096 101 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm24965-201ENSMUST00000157922 106 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 Mir6997-201ENSMUST00000184313 71 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm27733-201ENSMUST00000184803 68 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm43722-201ENSMUST00000196054 124 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm43090-201ENSMUST00000202459 314 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Usp47Q8BY87 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Usp47Q8BY87 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Usp47Q8BY87 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Usp47Q8BY87 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 AC152979.2-201ENSMUST00000219702 3814 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.14□□□□□ -1.91
Usp47Q8BY87 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.14□□□□□ -1.91
Usp47Q8BY87 Gm25094-201ENSMUST00000103992 131 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm12448-201ENSMUST00000118852 655 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 n-R5s164-201ENSMUST00000122664 112 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm23670-201ENSMUST00000157469 119 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm24010-201ENSMUST00000157731 282 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm24666-201ENSMUST00000158937 167 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Mir6353-201ENSMUST00000183596 113 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Mir7026-201ENSMUST00000184384 67 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm18406-201ENSMUST00000185872 669 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm30341-201ENSMUST00000194363 289 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm44425-201ENSMUST00000203739 429 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Usp47Q8BY87 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm24313-201ENSMUST00000082561 133 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm23447-201ENSMUST00000082798 163 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.13□□□□□ -1.91
Usp47Q8BY87 Mir592-201ENSMUST00000102113 96 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm14607-201ENSMUST00000119119 491 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm14927-201ENSMUST00000120283 454 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm25520-201ENSMUST00000158389 118 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm22093-201ENSMUST00000158980 111 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Mir6238-201ENSMUST00000184140 129 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm7182-201ENSMUST00000193351 732 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm43512-201ENSMUST00000198495 176 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Mir3069-201ENSMUST00000198802 65 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm46389-201ENSMUST00000223199 392 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 AC130823.2-201ENSMUST00000226169 290 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm22971-201ENSMUST00000083305 97 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 n-R5s200-201ENSMUST00000104194 113 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm23467-201ENSMUST00000157127 159 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm20526-201ENSMUST00000173416 158 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm8807-201ENSMUST00000179328 492 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Mir7017-201ENSMUST00000184894 62 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm9696-202ENSMUST00000191541 830 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm43975-201ENSMUST00000203023 481 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.12□□□□□ -1.91
Usp47Q8BY87 Gm17890-201ENSMUST00000221419 757 ntBASIC3.12□□□□□ -1.91
Usp47Q8BY87 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Usp47Q8BY87 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
Usp47Q8BY87 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms