Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm2005-201ENSMUST00000120759 542 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm12706-201ENSMUST00000121588 698 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm12276-201ENSMUST00000121709 301 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm24914-201ENSMUST00000157285 313 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm22839-201ENSMUST00000158436 304 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm17038-201ENSMUST00000166586 494 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm7438-201ENSMUST00000177664 639 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm7408-201ENSMUST00000178014 639 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm7386-201ENSMUST00000178020 639 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm3657-201ENSMUST00000178170 639 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm7415-201ENSMUST00000178205 639 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm7398-201ENSMUST00000178589 639 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm7391-201ENSMUST00000178680 639 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm7375-201ENSMUST00000179232 639 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm3681-201ENSMUST00000179940 639 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm28002-201ENSMUST00000184832 100 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm7858-201ENSMUST00000190177 622 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm38281-201ENSMUST00000192301 315 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm43493-201ENSMUST00000199837 202 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm45420-201ENSMUST00000211243 425 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm10038-201ENSMUST00000077233 441 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Gm24581-201ENSMUST00000103962 133 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Gm24840-201ENSMUST00000122603 147 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Gm17183-201ENSMUST00000171170 493 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Gm6651-201ENSMUST00000189471 271 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Gm44223-201ENSMUST00000204854 114 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Gm23925-201ENSMUST00000082471 132 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Gm25856-201ENSMUST00000082786 75 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Gm26128-201ENSMUST00000083170 110 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Mir421-201ENSMUST00000083575 76 ntBASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc40Q8BI79 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm27013-202ENSMUST00000205067 1436 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm15936-201ENSMUST00000118706 460 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm1989-201ENSMUST00000126244 636 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm23470-201ENSMUST00000157129 120 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm16289-201ENSMUST00000162079 183 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Mir8096-201ENSMUST00000184526 127 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Mir6975-201ENSMUST00000184879 61 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm5983-201ENSMUST00000197739 770 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm45687-201ENSMUST00000209454 155 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm45912-201ENSMUST00000210646 543 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc40Q8BI79 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms