Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm22367-201ENSMUST00000178930 132 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm28598-201ENSMUST00000186490 615 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm29268-201ENSMUST00000188669 615 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm29218-205ENSMUST00000190846 615 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm28978-201ENSMUST00000191120 615 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm37172-201ENSMUST00000191926 615 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm37495-201ENSMUST00000194590 264 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm19089-201ENSMUST00000197207 613 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm45105-201ENSMUST00000207824 397 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm45162-201ENSMUST00000209013 618 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm23518-201ENSMUST00000082835 153 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm25200-201ENSMUST00000083094 130 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm24792-201ENSMUST00000104286 128 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm13852-201ENSMUST00000122350 242 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm22561-201ENSMUST00000157331 84 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm23112-201ENSMUST00000158606 125 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm26159-201ENSMUST00000158968 104 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm25361-201ENSMUST00000179358 76 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm11395-201ENSMUST00000181011 499 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm9892-201ENSMUST00000182415 992 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm27599-201ENSMUST00000183758 174 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm42924-201ENSMUST00000197261 185 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm43007-201ENSMUST00000197618 291 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm42665-201ENSMUST00000202100 586 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm44011-201ENSMUST00000203336 394 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm6240-201ENSMUST00000208014 473 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Gm23932-201ENSMUST00000082914 107 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ubfd1Q78JW9 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm25848-201ENSMUST00000116790 144 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm14537-201ENSMUST00000117464 599 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm13803-201ENSMUST00000117547 489 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm11566-201ENSMUST00000118550 203 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm11784-201ENSMUST00000118568 474 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm11403-201ENSMUST00000122195 369 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm29408-201ENSMUST00000187536 216 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm37568-201ENSMUST00000191755 364 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm18956-201ENSMUST00000192857 480 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm4248-201ENSMUST00000196905 316 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm43367-201ENSMUST00000199986 625 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm34783-201ENSMUST00000209159 303 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 AC164117.2-201ENSMUST00000222090 327 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms