Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Rnf220Q6PDX6 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 n-R5s202-201ENSMUST00000104517 114 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm5757-201ENSMUST00000117494 528 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm11384-201ENSMUST00000121376 303 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm12854-201ENSMUST00000128518 297 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm26098-201ENSMUST00000157247 288 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm20656-201ENSMUST00000176925 518 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm27905-201ENSMUST00000184005 207 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm10105-201ENSMUST00000184601 270 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm3145-201ENSMUST00000188584 220 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm18036-201ENSMUST00000195256 272 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm44456-201ENSMUST00000196554 89 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm18409-202ENSMUST00000220105 529 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm7665-201ENSMUST00000076710 297 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm22061-201ENSMUST00000082557 107 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm6043-201ENSMUST00000099961 492 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Gm38388-201ENSMUST00000195569 1430 ntBASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Rnf220Q6PDX6 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm15553-201ENSMUST00000118757 430 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm14678-201ENSMUST00000121396 482 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm11894-201ENSMUST00000121579 328 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm15167-201ENSMUST00000121997 187 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm3104-201ENSMUST00000171004 473 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm26460-201ENSMUST00000175061 126 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm23725-201ENSMUST00000177876 107 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm27551-201ENSMUST00000184258 77 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm27608-201ENSMUST00000184822 162 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm37743-201ENSMUST00000194645 376 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm44343-201ENSMUST00000196702 90 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm44402-201ENSMUST00000203677 238 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm17779-201ENSMUST00000213395 394 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm22577-201ENSMUST00000083731 109 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.11□□□□□ -1.75
Rnf220Q6PDX6 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm24124-201ENSMUST00000104103 132 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm12191-201ENSMUST00000118307 348 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm11346-201ENSMUST00000118346 704 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm9703-201ENSMUST00000119573 343 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 118.2 ms