Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm6969-201ENSMUST00000140065 342 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm23327-201ENSMUST00000157420 78 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm22337-201ENSMUST00000157721 132 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm24167-201ENSMUST00000177733 124 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm24028-201ENSMUST00000178991 124 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm28534-201ENSMUST00000187744 676 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm43407-201ENSMUST00000199816 317 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm18325-201ENSMUST00000203228 835 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 AC158622.1-201ENSMUST00000217107 230 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 AL627387.1-201ENSMUST00000226063 250 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 AC165284.1-201ENSMUST00000228614 458 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm23300-201ENSMUST00000082712 125 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm25812-201ENSMUST00000082751 103 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Snord15b-201ENSMUST00000083032 145 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm24605-201ENSMUST00000104772 96 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm13329-201ENSMUST00000117063 265 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm15002-201ENSMUST00000118406 452 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm14926-201ENSMUST00000120650 508 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm11430-201ENSMUST00000121317 217 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm25103-201ENSMUST00000122671 318 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm25966-201ENSMUST00000157169 117 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm16326-201ENSMUST00000162843 414 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm26828-201ENSMUST00000180640 172 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm37732-201ENSMUST00000194377 316 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm20144-201ENSMUST00000203031 165 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm29884-201ENSMUST00000218403 453 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm22704-201ENSMUST00000083027 137 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cpsf6Q6NVF9 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cpsf6Q6NVF9 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.53□□□□□ -1.68
Cpsf6Q6NVF9 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Cpsf6Q6NVF9 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cpsf6Q6NVF9 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Cpsf6Q6NVF9 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cpsf6Q6NVF9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Cpsf6Q6NVF9 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.53□□□□□ -1.68
Cpsf6Q6NVF9 Gm14877-201ENSMUST00000119803 478 ntBASIC4.53□□□□□ -1.68
Cpsf6Q6NVF9 Gm13901-201ENSMUST00000137252 468 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 233.1 ms