Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
CtcfQ61164 Gm18120-201ENSMUST00000220079 511 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
CtcfQ61164 Gm8074-201ENSMUST00000095071 252 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CtcfQ61164 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CtcfQ61164 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CtcfQ61164 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.98□□□□□ -1.77
CtcfQ61164 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CtcfQ61164 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CtcfQ61164 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CtcfQ61164 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CtcfQ61164 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
CtcfQ61164 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm14731-201ENSMUST00000119216 376 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm12137-201ENSMUST00000119565 346 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm14766-201ENSMUST00000121689 367 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm22613-201ENSMUST00000122679 292 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CtcfQ61164 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm9593-201ENSMUST00000166034 469 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28574-201ENSMUST00000185757 699 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28781-201ENSMUST00000185760 696 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28339-201ENSMUST00000185845 696 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm29062-201ENSMUST00000186032 694 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm29574-201ENSMUST00000186226 696 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28828-201ENSMUST00000186601 696 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28057-201ENSMUST00000186603 615 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28255-201ENSMUST00000187101 694 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm29307-201ENSMUST00000187367 696 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28397-201ENSMUST00000187970 699 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28896-201ENSMUST00000188609 696 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28802-201ENSMUST00000188624 944 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm29339-201ENSMUST00000189613 696 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28654-201ENSMUST00000189801 379 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28159-201ENSMUST00000190296 696 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm29366-201ENSMUST00000190481 699 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm29407-201ENSMUST00000191468 696 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm38107-201ENSMUST00000194873 696 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm43043-201ENSMUST00000196579 412 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm19457-201ENSMUST00000200995 448 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.98□□□□□ -1.77
CtcfQ61164 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CtcfQ61164 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.98□□□□□ -1.77
CtcfQ61164 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CtcfQ61164 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.98□□□□□ -1.77
CtcfQ61164 Gm7495-201ENSMUST00000215099 426 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CtcfQ61164 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
CtcfQ61164 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CtcfQ61164 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
CtcfQ61164 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Gm23097-201ENSMUST00000083448 105 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.98□□□□□ -1.77
CtcfQ61164 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CtcfQ61164 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
CtcfQ61164 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.98□□□□□ -1.77
CtcfQ61164 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CtcfQ61164 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CtcfQ61164 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CtcfQ61164 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CtcfQ61164 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CtcfQ61164 Gm23273-201ENSMUST00000104058 135 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm25315-201ENSMUST00000116823 121 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm12268-201ENSMUST00000118398 442 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm6587-201ENSMUST00000120219 613 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm14008-201ENSMUST00000120483 274 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm12607-201ENSMUST00000120724 493 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm22561-201ENSMUST00000157331 84 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm23257-201ENSMUST00000158322 132 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.97□□□□□ -1.77
CtcfQ61164 Gm38041-201ENSMUST00000194445 661 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm42805-201ENSMUST00000196158 276 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm45146-201ENSMUST00000207108 221 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm18672-201ENSMUST00000208035 270 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm17991-201ENSMUST00000208139 297 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Gm29809-201ENSMUST00000218423 493 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CtcfQ61164 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.97□□□□□ -1.77
CtcfQ61164 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.97□□□□□ -1.77
CtcfQ61164 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CtcfQ61164 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CtcfQ61164 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CtcfQ61164 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
CtcfQ61164 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CtcfQ61164 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms