Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm14537-201ENSMUST00000117464 599 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm15002-201ENSMUST00000118406 452 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm24477-201ENSMUST00000157438 103 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm25572-201ENSMUST00000157527 172 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm24553-201ENSMUST00000158653 131 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm26501-201ENSMUST00000178307 107 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm21893-201ENSMUST00000179119 397 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm27189-201ENSMUST00000184119 190 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm37089-201ENSMUST00000195616 129 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Igkv11-118-201ENSMUST00000199448 346 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 AC159885.1-201ENSMUST00000222221 199 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim41Q5NCC3 n-R5s167-201ENSMUST00000083227 121 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Trim41Q5NCC3 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Trim41Q5NCC3 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
Trim41Q5NCC3 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim41Q5NCC3 AC153532.3-201ENSMUST00000218660 3848 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Gm37802-201ENSMUST00000194998 2643 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Gm24423-201ENSMUST00000101982 106 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Gm25861-201ENSMUST00000158251 109 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Gm10087-201ENSMUST00000167650 330 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Mir6408-201ENSMUST00000183643 91 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Ighv1-28-201ENSMUST00000192987 351 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Ighv1-6-201ENSMUST00000193849 293 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Gm44648-201ENSMUST00000208267 329 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 AC113031.3-201ENSMUST00000226552 190 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Gm26204-201ENSMUST00000082906 107 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Gm37788-201ENSMUST00000193958 2705 ntBASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Trim41Q5NCC3 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm44439-201ENSMUST00000203379 3592 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm24127-201ENSMUST00000104110 130 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 n-R5s52-201ENSMUST00000104614 113 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm15058-201ENSMUST00000117689 458 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm6969-201ENSMUST00000140065 342 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm24998-201ENSMUST00000157908 89 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm23474-201ENSMUST00000158884 75 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm2962-201ENSMUST00000159266 336 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm29330-201ENSMUST00000190032 699 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm44720-201ENSMUST00000206076 260 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm45710-201ENSMUST00000212847 215 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 AC100733.1-201ENSMUST00000228494 407 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm24705-201ENSMUST00000082808 107 ntBASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim41Q5NCC3 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim41Q5NCC3 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Gm38126-201ENSMUST00000195297 4003 ntBASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Gm44676-201ENSMUST00000208520 3055 ntBASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Gm13901-201ENSMUST00000137252 468 ntBASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Gm6214-201ENSMUST00000178845 541 ntBASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Gm34091-201ENSMUST00000200875 604 ntBASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Gm44402-201ENSMUST00000203677 238 ntBASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Gm44473-201ENSMUST00000204039 152 ntBASIC8.56□□□□□ -1.04
Trim41Q5NCC3 AC188459.1-201ENSMUST00000216651 300 ntBASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 CT025710.1-201ENSMUST00000222949 2533 ntBASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Gm6162-201ENSMUST00000194870 2930 ntBASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms