Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm24769-201ENSMUST00000158506 129 ntBASIC3.52□□□□□ -1.85
Ccdc88bQ4QRL3 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.52□□□□□ -1.85
Ccdc88bQ4QRL3 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Ccdc88bQ4QRL3 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.52□□□□□ -1.85
Ccdc88bQ4QRL3 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC3.52□□□□□ -1.85
Ccdc88bQ4QRL3 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.52□□□□□ -1.85
Ccdc88bQ4QRL3 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.52□□□□□ -1.85
Ccdc88bQ4QRL3 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
Ccdc88bQ4QRL3 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.52□□□□□ -1.85
Ccdc88bQ4QRL3 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.52□□□□□ -1.85
Ccdc88bQ4QRL3 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ccdc88bQ4QRL3 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.51□□□□□ -1.85
Ccdc88bQ4QRL3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ccdc88bQ4QRL3 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ccdc88bQ4QRL3 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.51□□□□□ -1.85
Ccdc88bQ4QRL3 Gm24313-201ENSMUST00000082561 133 ntBASIC3.51□□□□□ -1.85
Ccdc88bQ4QRL3 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Gm25832-201ENSMUST00000104140 130 ntBASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Gm12495-201ENSMUST00000119750 447 ntBASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Gm25044-201ENSMUST00000158603 104 ntBASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Mir3069-201ENSMUST00000198802 65 ntBASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc88bQ4QRL3 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Gm12513-201ENSMUST00000118617 352 ntBASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Gm13228-201ENSMUST00000118937 634 ntBASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Gm23642-201ENSMUST00000157858 258 ntBASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.49□□□□□ -1.85
Ccdc88bQ4QRL3 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ccdc88bQ4QRL3 Mir6353-201ENSMUST00000183596 113 ntBASIC3.48□□□□□ -1.85
Ccdc88bQ4QRL3 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc88bQ4QRL3 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc88bQ4QRL3 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.48□□□□□ -1.85
Ccdc88bQ4QRL3 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ccdc88bQ4QRL3 Gm13627-201ENSMUST00000119700 706 ntBASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 Gm28975-201ENSMUST00000186412 686 ntBASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 Gm25274-201ENSMUST00000104296 135 ntBASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 Gm15846-201ENSMUST00000116022 320 ntBASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 Gm26345-201ENSMUST00000157534 120 ntBASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 Gm16326-201ENSMUST00000162843 414 ntBASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 Gm37684-201ENSMUST00000192779 355 ntBASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc88bQ4QRL3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Ccdc88bQ4QRL3 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.46□□□□□ -1.85
Ccdc88bQ4QRL3 Gm15714-201ENSMUST00000117168 250 ntBASIC3.46□□□□□ -1.86
Ccdc88bQ4QRL3 Gm14957-201ENSMUST00000121069 817 ntBASIC3.46□□□□□ -1.86
Ccdc88bQ4QRL3 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc88bQ4QRL3 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc88bQ4QRL3 Gm30674-201ENSMUST00000214523 392 ntBASIC3.46□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 Gm43526-201ENSMUST00000196666 1565 ntBASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 Gm16510-201ENSMUST00000153501 249 ntBASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 Gm29556-201ENSMUST00000187591 696 ntBASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 Gm28650-201ENSMUST00000188413 411 ntBASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 Gm44703-201ENSMUST00000205724 248 ntBASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 Gm24661-201ENSMUST00000083205 104 ntBASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.45□□□□□ -1.86
Ccdc88bQ4QRL3 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 Gm15760-201ENSMUST00000119553 283 ntBASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 Gm23585-201ENSMUST00000157656 102 ntBASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 Mir8118-201ENSMUST00000183962 129 ntBASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc88bQ4QRL3 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 Gm12935-201ENSMUST00000119352 246 ntBASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 Gm14982-201ENSMUST00000121102 442 ntBASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 Gm16328-201ENSMUST00000126985 196 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms