Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Spg11Q3UHA3 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Spg11Q3UHA3 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.18□□□□□ -2.06
Spg11Q3UHA3 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC2.18□□□□□ -2.06
Spg11Q3UHA3 Gm44232-201ENSMUST00000204537 225 ntBASIC2.18□□□□□ -2.06
Spg11Q3UHA3 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC2.18□□□□□ -2.06
Spg11Q3UHA3 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.18□□□□□ -2.06
Spg11Q3UHA3 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Spg11Q3UHA3 Gm22683-201ENSMUST00000082854 137 ntBASIC2.18□□□□□ -2.06
Spg11Q3UHA3 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm43662-201ENSMUST00000198310 2271 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm18984-201ENSMUST00000193998 1124 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 AC117656.3-205ENSMUST00000224606 1205 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm43882-201ENSMUST00000204871 2264 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm12432-201ENSMUST00000119540 186 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm11430-201ENSMUST00000121317 217 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm26355-201ENSMUST00000158220 105 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm24212-201ENSMUST00000158258 132 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm16561-201ENSMUST00000163001 192 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm22646-201ENSMUST00000175130 115 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm44343-201ENSMUST00000196702 90 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 AC153801.1-201ENSMUST00000217904 947 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Gm5670-201ENSMUST00000093546 372 ntBASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Spg11Q3UHA3 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm6565-201ENSMUST00000121217 438 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm15530-201ENSMUST00000122206 555 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm22330-201ENSMUST00000158068 115 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm29815-201ENSMUST00000202418 178 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm45588-201ENSMUST00000211213 630 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm25976-201ENSMUST00000158695 130 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm24876-201ENSMUST00000158780 92 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm2878-201ENSMUST00000170173 486 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm24863-201ENSMUST00000179499 107 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm38356-201ENSMUST00000194313 408 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm4263-202ENSMUST00000221392 667 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm23623-201ENSMUST00000082461 107 ntBASIC2.16□□□□□ -2.06
Spg11Q3UHA3 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
Spg11Q3UHA3 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.15□□□□□ -2.06
Spg11Q3UHA3 Gm14957-201ENSMUST00000121069 817 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm27245-201ENSMUST00000184385 376 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm28399-201ENSMUST00000186221 318 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm28572-201ENSMUST00000187444 318 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.15□□□□□ -2.07
Spg11Q3UHA3 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm24207-201ENSMUST00000082781 108 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm13153-201ENSMUST00000120969 637 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm22159-201ENSMUST00000158412 130 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm43911-201ENSMUST00000203097 76 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm18346-201ENSMUST00000216782 325 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Gm5655-201ENSMUST00000221078 901 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.15□□□□□ -2.07
Spg11Q3UHA3 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Spg11Q3UHA3 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.14□□□□□ -2.07
Spg11Q3UHA3 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Spg11Q3UHA3 Gm7485-201ENSMUST00000119502 1109 ntBASIC2.14□□□□□ -2.07
Spg11Q3UHA3 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Spg11Q3UHA3 Gm10074-201ENSMUST00000174543 249 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms