Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm11407-201ENSMUST00000120362 1058 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm12607-201ENSMUST00000120724 493 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm6591-201ENSMUST00000121063 434 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm6762-201ENSMUST00000121769 289 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Snrpert-201ENSMUST00000121967 279 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm16274-201ENSMUST00000139251 592 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm6182-201ENSMUST00000156439 1208 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm24241-201ENSMUST00000157787 145 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm19203-201ENSMUST00000174049 939 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm27796-201ENSMUST00000183863 261 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm29259-201ENSMUST00000186396 694 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm28384-201ENSMUST00000189079 463 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm37085-201ENSMUST00000193780 196 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm43104-201ENSMUST00000197234 311 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm34091-201ENSMUST00000200875 604 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm44282-201ENSMUST00000203199 190 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm44092-201ENSMUST00000204470 258 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm44135-201ENSMUST00000205221 368 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm5322-201ENSMUST00000206142 699 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm7624-201ENSMUST00000209702 435 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm45312-201ENSMUST00000210566 311 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm23691-201ENSMUST00000101878 107 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm7974-201ENSMUST00000117154 408 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm13731-201ENSMUST00000117332 196 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm13678-201ENSMUST00000118926 340 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm14301-201ENSMUST00000120181 324 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm24061-201ENSMUST00000157489 120 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm22961-201ENSMUST00000157964 106 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm29576-201ENSMUST00000188020 678 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm28354-201ENSMUST00000190904 678 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm45530-201ENSMUST00000211658 225 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm18225-201ENSMUST00000216708 742 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm5175-202ENSMUST00000219699 529 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 AC116589.9-201ENSMUST00000221462 908 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm24707-201ENSMUST00000082812 107 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trafd1Q3UDK1 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm14794-201ENSMUST00000118181 192 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm7429-201ENSMUST00000118664 348 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm14901-201ENSMUST00000119001 283 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm14651-201ENSMUST00000147192 442 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm16569-201ENSMUST00000160526 314 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm27659-201ENSMUST00000183472 98 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms