Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm44563-201ENSMUST00000207958 178 ntBASIC5.53□□□□□ -1.52
Col9a1Q05722 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col9a1Q05722 Gm11360-201ENSMUST00000221898 262 ntBASIC5.53□□□□□ -1.52
Col9a1Q05722 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.53□□□□□ -1.52
Col9a1Q05722 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col9a1Q05722 Gm26495-201ENSMUST00000083152 137 ntBASIC5.53□□□□□ -1.52
Col9a1Q05722 Gm23796-201ENSMUST00000084011 160 ntBASIC5.53□□□□□ -1.52
Col9a1Q05722 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col9a1Q05722 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col9a1Q05722 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col9a1Q05722 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col9a1Q05722 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col9a1Q05722 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC5.53□□□□□ -1.52
Col9a1Q05722 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 AC158805.1-201ENSMUST00000218197 2631 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col9a1Q05722 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm4746-201ENSMUST00000120395 2406 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm26140-201ENSMUST00000103807 110 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm23608-201ENSMUST00000104545 128 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm14782-201ENSMUST00000120151 195 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm13992-201ENSMUST00000120558 156 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm23905-201ENSMUST00000157568 109 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm26414-201ENSMUST00000157674 269 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm24217-201ENSMUST00000158260 133 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm24308-201ENSMUST00000177773 114 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm24926-201ENSMUST00000178053 79 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm22632-201ENSMUST00000178266 79 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Mir8106-201ENSMUST00000184520 139 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm28623-201ENSMUST00000187219 192 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC5.52□□□□□ -1.53
Col9a1Q05722 AC122242.1-201ENSMUST00000224650 304 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm23928-201ENSMUST00000082469 145 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm22807-201ENSMUST00000082737 129 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Gm25896-201ENSMUST00000083713 136 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col9a1Q05722 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col9a1Q05722 Synpr-207ENSMUST00000223583 3362 ntBASIC5.52□□□□□ -1.53
Col9a1Q05722 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col9a1Q05722 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col9a1Q05722 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col9a1Q05722 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC5.51□□□□□ -1.53
Col9a1Q05722 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm23485-201ENSMUST00000104181 155 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm25564-201ENSMUST00000104604 132 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm12261-201ENSMUST00000117499 645 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm15772-201ENSMUST00000118533 438 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm12304-201ENSMUST00000120312 385 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm22725-201ENSMUST00000158092 110 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm24213-201ENSMUST00000158255 258 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm22611-201ENSMUST00000158288 150 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC5.51□□□□□ -1.53
Col9a1Q05722 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm2914-201ENSMUST00000186120 328 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm44539-201ENSMUST00000206010 238 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm45420-201ENSMUST00000211243 425 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm45860-201ENSMUST00000212700 334 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm5750-201ENSMUST00000218711 801 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm18617-201ENSMUST00000222311 259 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Gm10360-201ENSMUST00000097219 272 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col9a1Q05722 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col9a1Q05722 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.51□□□□□ -1.53
Col9a1Q05722 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col9a1Q05722 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col9a1Q05722 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col9a1Q05722 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col9a1Q05722 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col9a1Q05722 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col9a1Q05722 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Col9a1Q05722 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col9a1Q05722 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Col9a1Q05722 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col9a1Q05722 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col9a1Q05722 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col9a1Q05722 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col9a1Q05722 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col9a1Q05722 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.5□□□□□ -1.53
Col9a1Q05722 Gm44230-201ENSMUST00000203032 3550 ntBASIC5.5□□□□□ -1.53
Col9a1Q05722 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms