Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm19219-201ENSMUST00000215863 724 ntBASIC4.28□□□□□ -1.72
Ercc3P49135 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.28□□□□□ -1.72
Ercc3P49135 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.28□□□□□ -1.72
Ercc3P49135 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.28□□□□□ -1.72
Ercc3P49135 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ercc3P49135 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.28□□□□□ -1.72
Ercc3P49135 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.28□□□□□ -1.72
Ercc3P49135 Gm9818-201ENSMUST00000050900 255 ntBASIC4.28□□□□□ -1.72
Ercc3P49135 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ercc3P49135 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ercc3P49135 Mir193a-201ENSMUST00000083461 66 ntBASIC4.28□□□□□ -1.72
Ercc3P49135 Gm24490-201ENSMUST00000083803 98 ntBASIC4.28□□□□□ -1.72
Ercc3P49135 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ercc3P49135 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.28□□□□□ -1.72
Ercc3P49135 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.28□□□□□ -1.73
Ercc3P49135 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ercc3P49135 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.27□□□□□ -1.73
Ercc3P49135 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ercc3P49135 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ercc3P49135 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ercc3P49135 Gm11913-201ENSMUST00000119094 336 ntBASIC4.27□□□□□ -1.73
Ercc3P49135 Gm14417-201ENSMUST00000120036 1074 ntBASIC4.27□□□□□ -1.73
Ercc3P49135 Gm15244-201ENSMUST00000121122 130 ntBASIC4.27□□□□□ -1.73
Ercc3P49135 Gm4916-201ENSMUST00000126139 642 ntBASIC4.27□□□□□ -1.73
Ercc3P49135 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ercc3P49135 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ercc3P49135 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ercc3P49135 Gm4761-201ENSMUST00000178086 582 ntBASIC4.27□□□□□ -1.73
Ercc3P49135 Gm19637-201ENSMUST00000185933 579 ntBASIC4.27□□□□□ -1.73
Ercc3P49135 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.27□□□□□ -1.73
Ercc3P49135 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.27□□□□□ -1.73
Ercc3P49135 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC4.27□□□□□ -1.73
Ercc3P49135 Gm44355-201ENSMUST00000200417 104 ntBASIC4.27□□□□□ -1.73
Ercc3P49135 Gm45173-201ENSMUST00000206819 305 ntBASIC4.27□□□□□ -1.73
Ercc3P49135 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
Ercc3P49135 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC4.27□□□□□ -1.73
Ercc3P49135 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.27□□□□□ -1.73
Ercc3P49135 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ercc3P49135 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Ercc3P49135 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ercc3P49135 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.27□□□□□ -1.73
Ercc3P49135 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ercc3P49135 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ercc3P49135 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ercc3P49135 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ercc3P49135 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ercc3P49135 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ercc3P49135 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ercc3P49135 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ercc3P49135 Gm24982-201ENSMUST00000104456 132 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ercc3P49135 Gm14835-201ENSMUST00000119039 315 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm11430-201ENSMUST00000121317 217 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.26□□□□□ -1.73
Ercc3P49135 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ercc3P49135 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Ercc3P49135 Gm22236-201ENSMUST00000157093 106 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Ear-ps10-201ENSMUST00000161871 460 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm20542-201ENSMUST00000174582 372 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ercc3P49135 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ercc3P49135 Gm29576-201ENSMUST00000188020 678 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm6651-201ENSMUST00000189471 271 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Ercc3P49135 Gm28354-201ENSMUST00000190904 678 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm8023-201ENSMUST00000195298 903 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm18635-201ENSMUST00000199020 1060 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC4.26□□□□□ -1.73
Ercc3P49135 AC153541.1-201ENSMUST00000213786 294 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm16419-201ENSMUST00000221057 625 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC4.26□□□□□ -1.73
Ercc3P49135 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ercc3P49135 Gm23736-201ENSMUST00000082553 75 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm22304-201ENSMUST00000082688 129 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm25480-201ENSMUST00000083217 133 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ercc3P49135 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Ercc3P49135 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Ercc3P49135 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Ercc3P49135 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ercc3P49135 AC154511.1-201ENSMUST00000222578 1587 ntBASIC4.26□□□□□ -1.73
Ercc3P49135 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ercc3P49135 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ercc3P49135 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Ercc3P49135 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ercc3P49135 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ercc3P49135 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc3P49135 Gm14975-201ENSMUST00000118741 664 ntBASIC4.25□□□□□ -1.73
Ercc3P49135 Gm14240-201ENSMUST00000120353 546 ntBASIC4.25□□□□□ -1.73
Ercc3P49135 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.25□□□□□ -1.73
Ercc3P49135 Gm22890-201ENSMUST00000158642 144 ntBASIC4.25□□□□□ -1.73
Ercc3P49135 Gm25365-201ENSMUST00000158852 121 ntBASIC4.25□□□□□ -1.73
Ercc3P49135 Gm17183-201ENSMUST00000171170 493 ntBASIC4.25□□□□□ -1.73
Ercc3P49135 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC4.25□□□□□ -1.73
Ercc3P49135 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ercc3P49135 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms