Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.43□□□□□ -1.54
Rfx1P48377 Gm42666-201ENSMUST00000201954 152 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm43028-201ENSMUST00000202561 481 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 AC239878.2-201ENSMUST00000224048 464 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 AC101945.3-201ENSMUST00000226568 153 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm23796-201ENSMUST00000084011 160 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.43□□□□□ -1.54
Rfx1P48377 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.43□□□□□ -1.54
Rfx1P48377 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Rfx1P48377 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Rfx1P48377 Gm37096-201ENSMUST00000192317 2058 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx1P48377 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx1P48377 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Rfx1P48377 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 AC115047.2-201ENSMUST00000214421 1848 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm13386-201ENSMUST00000117677 124 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm12112-201ENSMUST00000117772 231 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm13518-201ENSMUST00000120018 233 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm7327-201ENSMUST00000120925 652 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm11894-201ENSMUST00000121579 328 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm15167-201ENSMUST00000121997 187 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm22038-201ENSMUST00000157277 242 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm23534-201ENSMUST00000157539 97 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm26045-201ENSMUST00000157862 97 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm23542-201ENSMUST00000158208 96 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.42□□□□□ -1.54
Rfx1P48377 Mir5129-201ENSMUST00000174938 78 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Mir3062-201ENSMUST00000174986 105 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.42□□□□□ -1.54
Rfx1P48377 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.42□□□□□ -1.54
Rfx1P48377 Gm6214-201ENSMUST00000178845 541 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm24862-201ENSMUST00000179103 79 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm23310-201ENSMUST00000179105 79 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm25461-201ENSMUST00000179293 79 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.42□□□□□ -1.54
Rfx1P48377 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.42□□□□□ -1.54
Rfx1P48377 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.42□□□□□ -1.54
Rfx1P48377 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.42□□□□□ -1.54
Rfx1P48377 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Rfx1P48377 Mir6343-201ENSMUST00000183584 84 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.42□□□□□ -1.54
Rfx1P48377 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx1P48377 Mir3970-201ENSMUST00000199287 90 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx1P48377 Gm18540-201ENSMUST00000204025 526 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm44055-201ENSMUST00000204376 247 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx1P48377 Gm17779-201ENSMUST00000213395 394 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 AC130222.1-201ENSMUST00000221198 256 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm6049-201ENSMUST00000222369 458 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 AV026068-231ENSMUST00000225862 482 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Rfx1P48377 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Rfx1P48377 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx1P48377 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.42□□□□□ -1.54
Rfx1P48377 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx1P48377 CT030170.3-201ENSMUST00000221205 1815 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Rfx1P48377 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Rfx1P48377 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rfx1P48377 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Rfx1P48377 AC133079.1-201ENSMUST00000220943 1881 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rfx1P48377 Gm14512-201ENSMUST00000117924 230 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Gm11363-201ENSMUST00000121672 548 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Gm12924-201ENSMUST00000121747 318 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Gm11403-201ENSMUST00000122195 369 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Gm13901-201ENSMUST00000137252 468 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Gm22037-201ENSMUST00000157280 296 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC5.41□□□□□ -1.54
Rfx1P48377 Gm20428-201ENSMUST00000174365 283 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Rfx1P48377 Gm19637-201ENSMUST00000185933 579 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.41□□□□□ -1.54
Rfx1P48377 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Gm44655-201ENSMUST00000207768 423 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.41□□□□□ -1.54
Rfx1P48377 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.41□□□□□ -1.54
Rfx1P48377 Gm20368-201ENSMUST00000220716 301 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.41□□□□□ -1.54
Rfx1P48377 AC154515.2-201ENSMUST00000226093 406 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rfx1P48377 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC5.41□□□□□ -1.54
Rfx1P48377 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 203.6 ms