Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm37085-201ENSMUST00000193780 196 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm37732-201ENSMUST00000194377 316 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm6510-201ENSMUST00000195916 574 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm43932-201ENSMUST00000204499 52 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm45742-201ENSMUST00000212400 433 ntBASIC3.84□□□□□ -1.79
Traf1P39428 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm31849-201ENSMUST00000220306 375 ntBASIC3.84□□□□□ -1.79
Traf1P39428 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.84□□□□□ -1.79
Traf1P39428 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Traf1P39428 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Traf1P39428 Gm26128-201ENSMUST00000083170 110 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Traf1P39428 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Traf1P39428 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Traf1P39428 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Traf1P39428 Gm14518-201ENSMUST00000117351 542 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm12149-201ENSMUST00000117511 654 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm15110-201ENSMUST00000117545 881 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm12803-201ENSMUST00000118907 821 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm14915-201ENSMUST00000120747 204 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm25666-201ENSMUST00000157702 107 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm23032-201ENSMUST00000157995 107 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm6374-201ENSMUST00000159051 788 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Traf1P39428 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm43224-201ENSMUST00000201567 898 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm44266-201ENSMUST00000205235 500 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm29754-201ENSMUST00000206269 358 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
Traf1P39428 Gm45273-201ENSMUST00000211559 281 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm7948-201ENSMUST00000212607 844 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm18388-201ENSMUST00000222339 557 ntBASIC3.83□□□□□ -1.8
Traf1P39428 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.83□□□□□ -1.8
Traf1P39428 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm23850-201ENSMUST00000083830 169 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Traf1P39428 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.83□□□□□ -1.8
Traf1P39428 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Traf1P39428 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.82□□□□□ -1.8
Traf1P39428 Gm24671-201ENSMUST00000104159 158 ntBASIC3.82□□□□□ -1.8
Traf1P39428 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Traf1P39428 Gm14973-201ENSMUST00000117248 255 ntBASIC3.82□□□□□ -1.8
Traf1P39428 Gm12492-201ENSMUST00000117665 564 ntBASIC3.82□□□□□ -1.8
Traf1P39428 Gm13454-201ENSMUST00000118166 483 ntBASIC3.82□□□□□ -1.8
Traf1P39428 Gm16412-201ENSMUST00000121602 273 ntBASIC3.82□□□□□ -1.8
Traf1P39428 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.82□□□□□ -1.8
Traf1P39428 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.82□□□□□ -1.8
Traf1P39428 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Traf1P39428 Nron-204ENSMUST00000158971 370 ntBASIC3.82□□□□□ -1.8
Traf1P39428 Gm10177-202ENSMUST00000161698 207 ntBASIC3.82□□□□□ -1.8
Traf1P39428 Gm27999-201ENSMUST00000183539 193 ntBASIC3.82□□□□□ -1.8
Traf1P39428 Gm44016-201ENSMUST00000203463 164 ntBASIC3.82□□□□□ -1.8
Traf1P39428 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.82□□□□□ -1.8
Traf1P39428 Gm39147-201ENSMUST00000211376 465 ntBASIC3.82□□□□□ -1.8
Traf1P39428 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
Traf1P39428 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.82□□□□□ -1.8
Traf1P39428 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.82□□□□□ -1.8
Traf1P39428 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.82□□□□□ -1.8
Traf1P39428 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.82□□□□□ -1.8
Traf1P39428 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.82□□□□□ -1.8
Traf1P39428 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC3.82□□□□□ -1.8
Traf1P39428 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Traf1P39428 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Traf1P39428 Gm10237-201ENSMUST00000078393 273 ntBASIC3.82□□□□□ -1.8
Traf1P39428 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Traf1P39428 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Traf1P39428 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Traf1P39428 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
Traf1P39428 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Traf1P39428 Gm12016-201ENSMUST00000119079 681 ntBASIC3.81□□□□□ -1.8
Traf1P39428 Gm22521-201ENSMUST00000158272 134 ntBASIC3.81□□□□□ -1.8
Traf1P39428 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Traf1P39428 Mir6914-201ENSMUST00000184999 69 ntBASIC3.81□□□□□ -1.8
Traf1P39428 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.81□□□□□ -1.8
Traf1P39428 Gm37979-201ENSMUST00000193065 712 ntBASIC3.81□□□□□ -1.8
Traf1P39428 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Traf1P39428 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Traf1P39428 Gm45614-201ENSMUST00000209994 721 ntBASIC3.81□□□□□ -1.8
Traf1P39428 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Traf1P39428 Gm46103-201ENSMUST00000217614 341 ntBASIC3.81□□□□□ -1.8
Traf1P39428 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.81□□□□□ -1.8
Traf1P39428 CT009733.1-203ENSMUST00000224033 451 ntBASIC3.81□□□□□ -1.8
Traf1P39428 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Traf1P39428 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Traf1P39428 Gm24622-201ENSMUST00000082619 162 ntBASIC3.81□□□□□ -1.8
Traf1P39428 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Traf1P39428 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.81□□□□□ -1.8
Traf1P39428 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.81□□□□□ -1.8
Traf1P39428 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Traf1P39428 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Traf1P39428 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Traf1P39428 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Traf1P39428 Gm13046-201ENSMUST00000117391 501 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Gm13627-201ENSMUST00000119700 706 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Gm23671-201ENSMUST00000157472 103 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms