Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RxraP28700 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RxraP28700 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RxraP28700 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RxraP28700 Mir669o-201ENSMUST00000103898 96 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm22269-201ENSMUST00000104002 130 ntBASIC3.82□□□□□ -1.8
RxraP28700 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RxraP28700 Gm25507-201ENSMUST00000116981 144 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm13046-201ENSMUST00000117391 501 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm14299-201ENSMUST00000117586 397 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm13155-201ENSMUST00000119277 646 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm13751-201ENSMUST00000120280 752 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm14428-201ENSMUST00000120408 822 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm8178-201ENSMUST00000121570 646 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.82□□□□□ -1.8
RxraP28700 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RxraP28700 Gm25667-201ENSMUST00000157701 275 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm16101-201ENSMUST00000160695 430 ntBASIC3.82□□□□□ -1.8
RxraP28700 Mir1251-201ENSMUST00000175486 84 ntBASIC3.82□□□□□ -1.8
RxraP28700 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.82□□□□□ -1.8
RxraP28700 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm10067-201ENSMUST00000179462 348 ntBASIC3.82□□□□□ -1.8
RxraP28700 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.82□□□□□ -1.8
RxraP28700 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.82□□□□□ -1.8
RxraP28700 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.82□□□□□ -1.8
RxraP28700 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.82□□□□□ -1.8
RxraP28700 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.82□□□□□ -1.8
RxraP28700 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm45232-201ENSMUST00000207811 162 ntBASIC3.82□□□□□ -1.8
RxraP28700 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.82□□□□□ -1.8
RxraP28700 Gm45380-201ENSMUST00000210465 315 ntBASIC3.82□□□□□ -1.8
RxraP28700 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RxraP28700 Gm16419-201ENSMUST00000221057 625 ntBASIC3.82□□□□□ -1.8
RxraP28700 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.82□□□□□ -1.8
RxraP28700 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.82□□□□□ -1.8
RxraP28700 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.82□□□□□ -1.8
RxraP28700 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RxraP28700 Gm7099-201ENSMUST00000080066 554 ntBASIC3.82□□□□□ -1.8
RxraP28700 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RxraP28700 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RxraP28700 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
RxraP28700 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RxraP28700 Gm9308-201ENSMUST00000119073 448 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm8217-201ENSMUST00000119136 465 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm15364-201ENSMUST00000119618 585 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm22613-201ENSMUST00000122679 292 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm6058-201ENSMUST00000154261 399 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm23981-201ENSMUST00000157136 106 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm24811-201ENSMUST00000175313 100 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
RxraP28700 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.81□□□□□ -1.8
RxraP28700 Gm27161-201ENSMUST00000183960 562 ntBASIC3.81□□□□□ -1.8
RxraP28700 Mir3620-201ENSMUST00000184710 61 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.81□□□□□ -1.8
RxraP28700 Gm28163-201ENSMUST00000187099 325 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm5116-201ENSMUST00000187732 463 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm29627-201ENSMUST00000187984 463 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm29576-201ENSMUST00000188020 678 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RxraP28700 Gm28354-201ENSMUST00000190904 678 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.81□□□□□ -1.8
RxraP28700 Gm31123-201ENSMUST00000192094 666 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm44016-201ENSMUST00000203463 164 ntBASIC3.81□□□□□ -1.8
RxraP28700 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm44871-201ENSMUST00000207821 497 ntBASIC3.81□□□□□ -1.8
RxraP28700 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RxraP28700 Gm2059-201ENSMUST00000212025 287 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.81□□□□□ -1.8
RxraP28700 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.81□□□□□ -1.8
RxraP28700 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.81□□□□□ -1.8
RxraP28700 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.81□□□□□ -1.8
RxraP28700 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.81□□□□□ -1.8
RxraP28700 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.81□□□□□ -1.8
RxraP28700 AC112972.1-201ENSMUST00000227329 365 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm26055-201ENSMUST00000083038 107 ntBASIC3.81□□□□□ -1.8
RxraP28700 Gm23848-201ENSMUST00000083826 106 ntBASIC3.81□□□□□ -1.8
RxraP28700 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.81□□□□□ -1.8
RxraP28700 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RxraP28700 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RxraP28700 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.8□□□□□ -1.8
RxraP28700 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
RxraP28700 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
RxraP28700 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RxraP28700 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RxraP28700 Gm11845-201ENSMUST00000117886 327 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm13228-201ENSMUST00000118937 634 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm12006-201ENSMUST00000120786 403 ntBASIC3.8□□□□□ -1.8
RxraP28700 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.8□□□□□ -1.8
RxraP28700 Gm11692-201ENSMUST00000122121 902 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm12368-201ENSMUST00000122251 434 ntBASIC3.8□□□□□ -1.8
RxraP28700 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.8□□□□□ -1.8
RxraP28700 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.8□□□□□ -1.8
RxraP28700 Gm23228-201ENSMUST00000157296 270 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm22816-201ENSMUST00000157450 117 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm23591-201ENSMUST00000157663 286 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm24550-201ENSMUST00000158648 279 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm15946-201ENSMUST00000160654 423 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms