Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm44208-201ENSMUST00000205199 421 ntBASIC5.18□□□□□ -1.58
Msx1P13297 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.18□□□□□ -1.58
Msx1P13297 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Msx1P13297 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Msx1P13297 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Msx1P13297 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Msx1P13297 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.18□□□□□ -1.58
Msx1P13297 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Msx1P13297 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Msx1P13297 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.18□□□□□ -1.58
Msx1P13297 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.18□□□□□ -1.58
Msx1P13297 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Msx1P13297 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.18□□□□□ -1.58
Msx1P13297 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Gm38265-201ENSMUST00000193479 3766 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Msx1P13297 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Gm36944-201ENSMUST00000192257 2759 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Msx1P13297 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Msx1P13297 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.17□□□□□ -1.58
Msx1P13297 Gm19428-201ENSMUST00000220512 1995 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Msx1P13297 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Msx1P13297 Gm23948-201ENSMUST00000104030 132 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Gm11785-201ENSMUST00000120165 601 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Gm13077-201ENSMUST00000121941 484 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.17□□□□□ -1.58
Msx1P13297 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC5.17□□□□□ -1.58
Msx1P13297 Gm22916-201ENSMUST00000157616 119 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Gm22447-201ENSMUST00000158155 92 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Gm23513-201ENSMUST00000158181 133 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Gm22160-201ENSMUST00000158405 328 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Gm16114-201ENSMUST00000161930 300 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Gm21991-201ENSMUST00000180006 508 ntBASIC5.17□□□□□ -1.58
Msx1P13297 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.17□□□□□ -1.58
Msx1P13297 Gm37636-201ENSMUST00000193583 359 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC5.17□□□□□ -1.58
Msx1P13297 Gm9238-201ENSMUST00000196181 329 ntBASIC5.17□□□□□ -1.58
Msx1P13297 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC5.17□□□□□ -1.58
Msx1P13297 Gm7065-201ENSMUST00000222150 474 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Msx1P13297 Gm23454-201ENSMUST00000083332 133 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.17□□□□□ -1.58
Msx1P13297 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.17□□□□□ -1.58
Msx1P13297 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC5.17□□□□□ -1.58
Msx1P13297 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Msx1P13297 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msx1P13297 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Msx1P13297 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Msx1P13297 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Msx1P13297 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Msx1P13297 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC5.16□□□□□ -1.58
Msx1P13297 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Msx1P13297 Gm24124-201ENSMUST00000104103 132 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Gm12062-201ENSMUST00000117533 259 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Gm11367-201ENSMUST00000117802 120 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Gm11447-201ENSMUST00000118983 858 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Gm12237-201ENSMUST00000120158 470 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC5.16□□□□□ -1.58
Msx1P13297 Gm26028-201ENSMUST00000158660 294 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Mir5129-201ENSMUST00000174938 78 ntBASIC5.16□□□□□ -1.58
Msx1P13297 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.16□□□□□ -1.58
Msx1P13297 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.16□□□□□ -1.58
Msx1P13297 Ighv1-46-201ENSMUST00000193988 351 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.16□□□□□ -1.58
Msx1P13297 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Gm44776-201ENSMUST00000207212 381 ntBASIC5.16□□□□□ -1.58
Msx1P13297 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.16□□□□□ -1.58
Msx1P13297 AC123618.1-201ENSMUST00000220174 360 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC5.16□□□□□ -1.58
Msx1P13297 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Msx1P13297 Gm23517-201ENSMUST00000082830 192 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Msx1P13297 Gm28634-201ENSMUST00000191087 2613 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.16□□□□□ -1.58
Msx1P13297 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Msx1P13297 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.16□□□□□ -1.58
Msx1P13297 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Msx1P13297 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Msx1P13297 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Msx1P13297 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.16□□□□□ -1.58
Msx1P13297 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Msx1P13297 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.15□□□□□ -1.58
Msx1P13297 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Msx1P13297 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms