Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm42924-201ENSMUST00000197261 185 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm44475-201ENSMUST00000204041 424 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm29754-201ENSMUST00000206269 358 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm29920-201ENSMUST00000206876 754 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Lire1P11260 Gm45395-201ENSMUST00000209891 559 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm7753-201ENSMUST00000221007 867 ntBASIC3.39□□□□□ -1.87
Lire1P11260 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.39□□□□□ -1.87
Lire1P11260 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.39□□□□□ -1.87
Lire1P11260 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Lire1P11260 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Lire1P11260 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Mir30e-201ENSMUST00000083475 92 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Lire1P11260 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Lire1P11260 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Lire1P11260 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Lire1P11260 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Lire1P11260 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Lire1P11260 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Lire1P11260 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
Lire1P11260 Gm25765-201ENSMUST00000104100 132 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm24127-201ENSMUST00000104110 130 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm22590-201ENSMUST00000104247 128 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Lire1P11260 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Lire1P11260 Gm11704-201ENSMUST00000120031 214 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm12095-201ENSMUST00000121962 816 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm26476-201ENSMUST00000122618 313 ntBASIC3.38□□□□□ -1.87
Lire1P11260 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Lire1P11260 Gm23123-201ENSMUST00000157648 144 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm24727-201ENSMUST00000158231 144 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm23190-201ENSMUST00000180307 64 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm27392-201ENSMUST00000185041 101 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm7329-201ENSMUST00000185915 210 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.38□□□□□ -1.87
Lire1P11260 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm17966-201ENSMUST00000193453 594 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.38□□□□□ -1.87
Lire1P11260 Gm45400-201ENSMUST00000211603 653 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Lire1P11260 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.38□□□□□ -1.87
Lire1P11260 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Lire1P11260 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Lire1P11260 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.38□□□□□ -1.87
Lire1P11260 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Lire1P11260 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Lire1P11260 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Lire1P11260 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Lire1P11260 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.38□□□□□ -1.87
Lire1P11260 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Lire1P11260 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Lire1P11260 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Lire1P11260 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Lire1P11260 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Lire1P11260 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Lire1P11260 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Lire1P11260 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Lire1P11260 Gm13076-201ENSMUST00000118041 204 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm14358-201ENSMUST00000118458 403 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Mup-ps1-201ENSMUST00000120720 544 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.37□□□□□ -1.87
Lire1P11260 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.37□□□□□ -1.87
Lire1P11260 Gm26101-201ENSMUST00000157246 105 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm22560-201ENSMUST00000157332 120 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm22380-201ENSMUST00000157479 95 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm25977-201ENSMUST00000158697 85 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm22531-201ENSMUST00000158819 140 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Lire1P11260 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Lire1P11260 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm8641-201ENSMUST00000186995 826 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.37□□□□□ -1.87
Lire1P11260 Gm6680-201ENSMUST00000192789 950 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm43901-201ENSMUST00000203247 453 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.37□□□□□ -1.87
Lire1P11260 Gm18252-203ENSMUST00000215855 757 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.37□□□□□ -1.87
Lire1P11260 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.37□□□□□ -1.87
Lire1P11260 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.37□□□□□ -1.87
Lire1P11260 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm12582-201ENSMUST00000030555 697 ntBASIC3.37□□□□□ -1.87
Lire1P11260 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Lire1P11260 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Lire1P11260 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Lire1P11260 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Lire1P11260 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Lire1P11260 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms