Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd4P10628 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd4P10628 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd4P10628 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm25419-201ENSMUST00000104215 191 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm13692-201ENSMUST00000120774 371 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm5391-201ENSMUST00000121155 613 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm22514-201ENSMUST00000122547 308 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm23262-201ENSMUST00000158323 168 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Mir3964-201ENSMUST00000174898 74 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21842-201ENSMUST00000177552 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21626-201ENSMUST00000177791 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21562-201ENSMUST00000177888 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21539-201ENSMUST00000177925 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21599-201ENSMUST00000178249 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21914-201ENSMUST00000178452 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21723-201ENSMUST00000178692 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21916-201ENSMUST00000178771 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21801-201ENSMUST00000178865 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21633-201ENSMUST00000178941 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21821-201ENSMUST00000179646 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21588-201ENSMUST00000180074 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21780-201ENSMUST00000180128 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21572-201ENSMUST00000180134 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm21529-201ENSMUST00000180175 498 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Mir6416-201ENSMUST00000183664 117 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm27551-201ENSMUST00000184258 77 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm2950-201ENSMUST00000185530 520 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm29370-202ENSMUST00000187476 499 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm10237-201ENSMUST00000078393 273 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm23055-201ENSMUST00000082805 94 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Mir17-201ENSMUST00000083574 84 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd4P10628 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.09□□□□□ -1.75
Hoxd4P10628 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Hoxd4P10628 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Hoxd4P10628 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.09□□□□□ -1.76
Hoxd4P10628 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Hoxd4P10628 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Hoxd4P10628 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Hoxd4P10628 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.09□□□□□ -1.76
Hoxd4P10628 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd4P10628 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd4P10628 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Hoxd4P10628 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Hoxd4P10628 Mir105-201ENSMUST00000104655 80 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm14771-201ENSMUST00000118249 203 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm16017-201ENSMUST00000119834 208 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm23829-201ENSMUST00000157392 270 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm23546-201ENSMUST00000158211 137 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd4P10628 Mir5103-201ENSMUST00000175111 79 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm23402-201ENSMUST00000178130 107 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm22633-201ENSMUST00000179834 107 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm26189-201ENSMUST00000179879 107 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd4P10628 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm18384-201ENSMUST00000195974 808 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm43408-201ENSMUST00000198263 440 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm19908-201ENSMUST00000204684 391 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm17766-201ENSMUST00000209223 442 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm6988-201ENSMUST00000222676 375 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 AC133598.3-201ENSMUST00000224322 568 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Gm23626-201ENSMUST00000082458 133 ntBASIC4.08□□□□□ -1.76
Hoxd4P10628 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd4P10628 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd4P10628 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd4P10628 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd4P10628 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd4P10628 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Hoxd4P10628 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Hoxd4P10628 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd4P10628 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms