Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm25058-201ENSMUST00000157365 128 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm22084-201ENSMUST00000157585 105 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm22675-201ENSMUST00000158430 104 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm26219-201ENSMUST00000175216 71 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Lmx1bO88609 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm22367-201ENSMUST00000178930 132 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm27385-201ENSMUST00000184747 104 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm30280-201ENSMUST00000192214 262 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm43825-201ENSMUST00000199650 734 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.82□□□□□ -1.8
Lmx1bO88609 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm44060-201ENSMUST00000204440 410 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm44927-201ENSMUST00000207573 716 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm44959-201ENSMUST00000209127 231 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm2829-201ENSMUST00000213121 499 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.82□□□□□ -1.8
Lmx1bO88609 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm29884-201ENSMUST00000218403 453 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.82□□□□□ -1.8
Lmx1bO88609 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Lmx1bO88609 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Lmx1bO88609 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.82□□□□□ -1.8
Lmx1bO88609 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Lmx1bO88609 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Lmx1bO88609 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Lmx1bO88609 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Lmx1bO88609 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Lmx1bO88609 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lmx1bO88609 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm11221-201ENSMUST00000117230 597 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm13550-201ENSMUST00000118185 525 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm13239-201ENSMUST00000119920 637 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm12872-201ENSMUST00000121835 320 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.81□□□□□ -1.8
Lmx1bO88609 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm23959-201ENSMUST00000157208 324 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm25339-201ENSMUST00000157458 232 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm24060-201ENSMUST00000157494 95 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm25456-201ENSMUST00000157952 109 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm7925-201ENSMUST00000166690 401 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm25999-201ENSMUST00000175398 133 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm24100-201ENSMUST00000178592 79 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm23191-201ENSMUST00000179147 107 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm24137-201ENSMUST00000180055 79 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm22391-201ENSMUST00000180356 79 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm28625-201ENSMUST00000188309 205 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm37455-201ENSMUST00000191993 529 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm18964-201ENSMUST00000193013 563 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm8790-201ENSMUST00000194108 322 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm7449-201ENSMUST00000194393 663 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm5660-201ENSMUST00000197453 1149 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lmx1bO88609 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm7948-201ENSMUST00000212607 844 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.81□□□□□ -1.8
Lmx1bO88609 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm23510-201ENSMUST00000083083 163 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm25141-201ENSMUST00000083177 107 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lmx1bO88609 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm8402-201ENSMUST00000118183 1770 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm8383-201ENSMUST00000121179 1770 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Lmx1bO88609 Gm44321-201ENSMUST00000204262 2855 ntBASIC3.81□□□□□ -1.8
Lmx1bO88609 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms