Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm22521-201ENSMUST00000158272 134 ntBASIC2.44□□□□□ -2.02
Sdc4O35988 Gm17065-201ENSMUST00000165245 239 ntBASIC2.44□□□□□ -2.02
Sdc4O35988 Samd15-201ENSMUST00000169669 1194 ntBASIC2.44□□□□□ -2.02
Sdc4O35988 Gm4468-201ENSMUST00000170206 294 ntBASIC2.44□□□□□ -2.02
Sdc4O35988 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.44□□□□□ -2.02
Sdc4O35988 Gm27698-201ENSMUST00000184060 249 ntBASIC2.44□□□□□ -2.02
Sdc4O35988 Gm43489-201ENSMUST00000196810 993 ntBASIC2.44□□□□□ -2.02
Sdc4O35988 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.44□□□□□ -2.02
Sdc4O35988 Gm8031-201ENSMUST00000213430 626 ntBASIC2.44□□□□□ -2.02
Sdc4O35988 Gm8249-201ENSMUST00000219225 465 ntBASIC2.44□□□□□ -2.02
Sdc4O35988 Gm18704-201ENSMUST00000219736 446 ntBASIC2.44□□□□□ -2.02
Sdc4O35988 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.44□□□□□ -2.02
Sdc4O35988 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Sdc4O35988 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Sdc4O35988 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
Sdc4O35988 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Sdc4O35988 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Sdc4O35988 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Sdc4O35988 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Sdc4O35988 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.43□□□□□ -2.02
Sdc4O35988 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc4O35988 Gm21827-201ENSMUST00000178247 423 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc4O35988 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc4O35988 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 Mir378a-201ENSMUST00000198300 66 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Sdc4O35988 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Sdc4O35988 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.43□□□□□ -2.02
Sdc4O35988 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.43□□□□□ -2.02
Sdc4O35988 Gm18892-201ENSMUST00000217628 881 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.43□□□□□ -2.02
Sdc4O35988 AC122465.3-201ENSMUST00000221644 355 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 CT030166.1-201ENSMUST00000222654 357 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.43□□□□□ -2.02
Sdc4O35988 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc4O35988 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Sdc4O35988 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc4O35988 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Sdc4O35988 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Sdc4O35988 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Sdc4O35988 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Sdc4O35988 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Sdc4O35988 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Sdc4O35988 Mir542-201ENSMUST00000102186 85 ntBASIC2.42□□□□□ -2.02
Sdc4O35988 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Sdc4O35988 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Sdc4O35988 Gm13862-201ENSMUST00000121220 197 ntBASIC2.42□□□□□ -2.02
Sdc4O35988 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
Sdc4O35988 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.42□□□□□ -2.02
Sdc4O35988 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.42□□□□□ -2.02
Sdc4O35988 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.42□□□□□ -2.02
Sdc4O35988 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Sdc4O35988 Gm17063-201ENSMUST00000168135 456 ntBASIC2.42□□□□□ -2.02
Sdc4O35988 Gm27399-201ENSMUST00000184250 78 ntBASIC2.42□□□□□ -2.02
Sdc4O35988 Gm43991-201ENSMUST00000203751 274 ntBASIC2.42□□□□□ -2.02
Sdc4O35988 Gm45189-201ENSMUST00000208567 363 ntBASIC2.42□□□□□ -2.02
Sdc4O35988 Gm45273-201ENSMUST00000211559 281 ntBASIC2.42□□□□□ -2.02
Sdc4O35988 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.42□□□□□ -2.02
Sdc4O35988 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.42□□□□□ -2.02
Sdc4O35988 AC158536.1-201ENSMUST00000222510 256 ntBASIC2.42□□□□□ -2.02
Sdc4O35988 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Sdc4O35988 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Sdc4O35988 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Sdc4O35988 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Sdc4O35988 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Sdc4O35988 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Sdc4O35988 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Sdc4O35988 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.41□□□□□ -2.02
Sdc4O35988 Gm14579-201ENSMUST00000117068 283 ntBASIC2.41□□□□□ -2.02
Sdc4O35988 Gm11843-201ENSMUST00000118984 425 ntBASIC2.41□□□□□ -2.02
Sdc4O35988 Gm7846-201ENSMUST00000145844 274 ntBASIC2.41□□□□□ -2.02
Sdc4O35988 Gm23980-201ENSMUST00000157135 158 ntBASIC2.41□□□□□ -2.02
Sdc4O35988 Gm22563-201ENSMUST00000157333 269 ntBASIC2.41□□□□□ -2.02
Sdc4O35988 Gm37817-201ENSMUST00000195276 434 ntBASIC2.41□□□□□ -2.02
Sdc4O35988 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Sdc4O35988 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Sdc4O35988 Gm19418-201ENSMUST00000197436 580 ntBASIC2.41□□□□□ -2.02
Sdc4O35988 Gm4528-201ENSMUST00000207905 551 ntBASIC2.41□□□□□ -2.02
Sdc4O35988 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.41□□□□□ -2.02
Sdc4O35988 AC154851.2-201ENSMUST00000222172 644 ntBASIC2.41□□□□□ -2.02
Sdc4O35988 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Sdc4O35988 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sdc4O35988 Gm14771-201ENSMUST00000118249 203 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Gm12878-201ENSMUST00000118744 332 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Sdc4O35988 Gm11819-201ENSMUST00000122192 372 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.4□□□□□ -2.03
Sdc4O35988 Gm25642-201ENSMUST00000175137 66 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Gm8807-201ENSMUST00000179328 492 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.03
Sdc4O35988 Gm28744-201ENSMUST00000189939 340 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Gm19280-201ENSMUST00000190191 205 ntBASIC2.4□□□□□ -2.03
Sdc4O35988 Gm37523-201ENSMUST00000194901 412 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms