Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm5963-201ENSMUST00000143451 236 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm25559-201ENSMUST00000157182 74 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm23198-201ENSMUST00000158811 91 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm26194-201ENSMUST00000175036 71 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm22108-201ENSMUST00000177961 106 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm24798-201ENSMUST00000179334 106 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm27539-201ENSMUST00000184971 224 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm28404-201ENSMUST00000190242 453 ntBASIC3.61□□□□□ -1.83
Clk3O35492 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm37692-201ENSMUST00000192633 232 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm29740-201ENSMUST00000193182 655 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm37431-201ENSMUST00000195102 111 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm2676-201ENSMUST00000207279 606 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm6240-201ENSMUST00000208014 473 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm18113-201ENSMUST00000220630 303 ntBASIC3.61□□□□□ -1.83
Clk3O35492 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm16419-201ENSMUST00000221057 625 ntBASIC3.61□□□□□ -1.83
Clk3O35492 AC162857.1-201ENSMUST00000226614 400 ntBASIC3.61□□□□□ -1.83
Clk3O35492 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.61□□□□□ -1.83
Clk3O35492 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.61□□□□□ -1.83
Clk3O35492 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Clk3O35492 Gm24950-201ENSMUST00000082768 191 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm23971-201ENSMUST00000083317 191 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm23849-201ENSMUST00000083833 191 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm26316-201ENSMUST00000083886 191 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC3.61□□□□□ -1.83
Clk3O35492 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Clk3O35492 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Clk3O35492 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Clk3O35492 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.61□□□□□ -1.83
Clk3O35492 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clk3O35492 Gm14172-201ENSMUST00000118255 644 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Gm22199-201ENSMUST00000122660 126 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Gm22613-201ENSMUST00000122679 292 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Gm22561-201ENSMUST00000157331 84 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 Gm20542-201ENSMUST00000174582 372 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Gm19898-201ENSMUST00000177490 251 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 Gm8600-201ENSMUST00000186320 905 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Gm17946-201ENSMUST00000186856 538 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.6□□□□□ -1.83
Clk3O35492 Gm29334-201ENSMUST00000190334 357 ntBASIC3.6□□□□□ -1.83
Clk3O35492 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Gm9236-201ENSMUST00000196892 587 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clk3O35492 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.6□□□□□ -1.83
Clk3O35492 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Clk3O35492 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Clk3O35492 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Clk3O35492 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.6□□□□□ -1.83
Clk3O35492 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clk3O35492 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
Clk3O35492 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Clk3O35492 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Clk3O35492 Gm23273-201ENSMUST00000104058 135 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Clk3O35492 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Clk3O35492 Gm14299-201ENSMUST00000117586 397 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm12252-201ENSMUST00000119517 219 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm15112-201ENSMUST00000120152 860 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm15120-201ENSMUST00000120602 301 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm11931-201ENSMUST00000121630 447 ntBASIC3.59□□□□□ -1.83
Clk3O35492 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Clk3O35492 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Clk3O35492 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
Clk3O35492 Mir3964-201ENSMUST00000174898 74 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm4076-201ENSMUST00000179230 965 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm28594-201ENSMUST00000187022 661 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm6651-201ENSMUST00000189471 271 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm29184-201ENSMUST00000190038 334 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.59□□□□□ -1.83
Clk3O35492 Gm43804-201ENSMUST00000198280 456 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.59□□□□□ -1.83
Clk3O35492 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.59□□□□□ -1.83
Clk3O35492 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
Clk3O35492 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.59□□□□□ -1.83
Clk3O35492 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.59□□□□□ -1.83
Clk3O35492 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.59□□□□□ -1.83
Clk3O35492 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms