Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.6□□□□□ -1.99
Chd3B1AR17 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Chd3B1AR17 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Chd3B1AR17 Gm14593-201ENSMUST00000119948 294 ntBASIC2.59□□□□□ -1.99
Chd3B1AR17 Snord93-201ENSMUST00000175580 71 ntBASIC2.59□□□□□ -1.99
Chd3B1AR17 Gm27698-201ENSMUST00000184060 249 ntBASIC2.59□□□□□ -1.99
Chd3B1AR17 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.59□□□□□ -1.99
Chd3B1AR17 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Chd3B1AR17 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Chd3B1AR17 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Chd3B1AR17 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Chd3B1AR17 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Chd3B1AR17 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Chd3B1AR17 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.59□□□□□ -2
Chd3B1AR17 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Chd3B1AR17 Gm15282-201ENSMUST00000117707 300 ntBASIC2.59□□□□□ -2
Chd3B1AR17 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
Chd3B1AR17 Gm15019-201ENSMUST00000120148 434 ntBASIC2.59□□□□□ -2
Chd3B1AR17 Gm15536-201ENSMUST00000121411 114 ntBASIC2.59□□□□□ -2
Chd3B1AR17 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.59□□□□□ -2
Chd3B1AR17 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Chd3B1AR17 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.59□□□□□ -2
Chd3B1AR17 Gm25883-201ENSMUST00000157781 271 ntBASIC2.59□□□□□ -2
Chd3B1AR17 Gm26004-201ENSMUST00000158804 116 ntBASIC2.59□□□□□ -2
Chd3B1AR17 Gm5967-201ENSMUST00000172723 494 ntBASIC2.59□□□□□ -2
Chd3B1AR17 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC2.59□□□□□ -2
Chd3B1AR17 Gm18892-201ENSMUST00000217628 881 ntBASIC2.59□□□□□ -2
Chd3B1AR17 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.59□□□□□ -2
Chd3B1AR17 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.59□□□□□ -2
Chd3B1AR17 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Chd3B1AR17 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.59□□□□□ -2
Chd3B1AR17 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.59□□□□□ -2
Chd3B1AR17 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.59□□□□□ -2
Chd3B1AR17 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.58□□□□□ -2
Chd3B1AR17 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Chd3B1AR17 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Chd3B1AR17 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Chd3B1AR17 Gm12878-201ENSMUST00000118744 332 ntBASIC2.58□□□□□ -2
Chd3B1AR17 Gm14877-201ENSMUST00000119803 478 ntBASIC2.58□□□□□ -2
Chd3B1AR17 Gm11819-201ENSMUST00000122192 372 ntBASIC2.58□□□□□ -2
Chd3B1AR17 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC2.58□□□□□ -2
Chd3B1AR17 Gm23470-201ENSMUST00000157129 120 ntBASIC2.58□□□□□ -2
Chd3B1AR17 Gm26099-201ENSMUST00000157248 109 ntBASIC2.58□□□□□ -2
Chd3B1AR17 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.58□□□□□ -2
Chd3B1AR17 Gm23714-201ENSMUST00000179259 105 ntBASIC2.58□□□□□ -2
Chd3B1AR17 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.58□□□□□ -2
Chd3B1AR17 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Chd3B1AR17 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.58□□□□□ -2
Chd3B1AR17 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Chd3B1AR17 Gm14163-201ENSMUST00000117342 217 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm13901-201ENSMUST00000137252 468 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm23895-201ENSMUST00000158108 160 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm18354-201ENSMUST00000173515 1068 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm23289-201ENSMUST00000175615 108 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm20718-201ENSMUST00000176058 259 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm27786-201ENSMUST00000184337 70 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm18747-201ENSMUST00000198129 648 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm43264-201ENSMUST00000202284 325 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm7753-201ENSMUST00000221007 867 ntBASIC2.57□□□□□ -2
Chd3B1AR17 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.57□□□□□ -2
Chd3B1AR17 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.57□□□□□ -2
Chd3B1AR17 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC2.57□□□□□ -2
Chd3B1AR17 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.57□□□□□ -2
Chd3B1AR17 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.57□□□□□ -2
Chd3B1AR17 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.57□□□□□ -2
Chd3B1AR17 Gm11221-201ENSMUST00000117230 597 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Chd3B1AR17 Gm26406-201ENSMUST00000158503 124 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Mir7226-201ENSMUST00000184953 60 ntBASIC2.57□□□□□ -2
Chd3B1AR17 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC2.57□□□□□ -2
Chd3B1AR17 Gm5731-201ENSMUST00000190969 481 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm44408-201ENSMUST00000200205 66 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm43954-201ENSMUST00000204634 544 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Gm45189-201ENSMUST00000208567 363 ntBASIC2.57□□□□□ -2
Chd3B1AR17 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.57□□□□□ -2
Chd3B1AR17 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Chd3B1AR17 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.57□□□□□ -2
Chd3B1AR17 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC2.57□□□□□ -2
Chd3B1AR17 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Chd3B1AR17 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Chd3B1AR17 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Chd3B1AR17 Gm23950-201ENSMUST00000104026 129 ntBASIC2.56□□□□□ -2
Chd3B1AR17 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Chd3B1AR17 Gm13433-201ENSMUST00000121701 240 ntBASIC2.56□□□□□ -2
Chd3B1AR17 Gm15147-201ENSMUST00000122263 483 ntBASIC2.56□□□□□ -2
Chd3B1AR17 Gm24075-201ENSMUST00000158175 72 ntBASIC2.56□□□□□ -2
Chd3B1AR17 Gm16111-201ENSMUST00000162128 285 ntBASIC2.56□□□□□ -2
Chd3B1AR17 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.56□□□□□ -2
Chd3B1AR17 Gm27898-201ENSMUST00000183987 80 ntBASIC2.56□□□□□ -2
Chd3B1AR17 Gm5268-201ENSMUST00000189212 940 ntBASIC2.56□□□□□ -2
Chd3B1AR17 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.56□□□□□ -2
Chd3B1AR17 Gm45273-201ENSMUST00000211559 281 ntBASIC2.56□□□□□ -2
Chd3B1AR17 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.56□□□□□ -2
Chd3B1AR17 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.56□□□□□ -2
Chd3B1AR17 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Chd3B1AR17 AC165437.1-201ENSMUST00000228640 536 ntBASIC2.56□□□□□ -2
Chd3B1AR17 Gm9174-201ENSMUST00000078149 255 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms