Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm37219-201ENSMUST00000192036 926 ntBASIC2.73□□□□□ -1.97
Scn3aA2ASI5 Trdv3-201ENSMUST00000198551 309 ntBASIC2.73□□□□□ -1.97
Scn3aA2ASI5 Gm43239-201ENSMUST00000200131 201 ntBASIC2.73□□□□□ -1.97
Scn3aA2ASI5 Gm5322-201ENSMUST00000206142 699 ntBASIC2.73□□□□□ -1.97
Scn3aA2ASI5 Gm4528-201ENSMUST00000207905 551 ntBASIC2.73□□□□□ -1.97
Scn3aA2ASI5 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.73□□□□□ -1.97
Scn3aA2ASI5 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.73□□□□□ -1.97
Scn3aA2ASI5 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.73□□□□□ -1.97
Scn3aA2ASI5 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Scn3aA2ASI5 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Scn3aA2ASI5 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Scn3aA2ASI5 Gm8569-201ENSMUST00000117630 647 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm14939-201ENSMUST00000120347 680 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm13555-201ENSMUST00000121668 319 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Defa-ps12-201ENSMUST00000122353 193 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm25120-201ENSMUST00000180148 79 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm25130-201ENSMUST00000082650 156 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm12880-201ENSMUST00000120652 494 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm25185-201ENSMUST00000157754 96 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm28155-201ENSMUST00000191066 151 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm42454-201ENSMUST00000196805 1181 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC2.72□□□□□ -1.97
Scn3aA2ASI5 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Gm15025-201ENSMUST00000118434 418 ntBASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Gm14927-201ENSMUST00000120283 454 ntBASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Gm14840-201ENSMUST00000122135 594 ntBASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Gm43316-201ENSMUST00000197252 1295 ntBASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Gm43669-201ENSMUST00000198229 436 ntBASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Mir497-201ENSMUST00000200557 84 ntBASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Gm43967-201ENSMUST00000203787 301 ntBASIC2.71□□□□□ -1.98
Scn3aA2ASI5 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.71□□□□□ -1.98
Scn3aA2ASI5 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Scn3aA2ASI5 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm12954-201ENSMUST00000118610 611 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm15488-201ENSMUST00000121682 670 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm16569-201ENSMUST00000160526 314 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm18354-201ENSMUST00000173515 1068 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm8807-201ENSMUST00000179328 492 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm27025-201ENSMUST00000182392 942 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm8392-201ENSMUST00000185647 835 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm37879-201ENSMUST00000193112 1995 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm44844-201ENSMUST00000207242 336 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm19599-201ENSMUST00000218898 358 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm22036-201ENSMUST00000157279 215 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm44088-201ENSMUST00000204595 237 ntBASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Scn3aA2ASI5 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 188.5 ms