Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm23792-201ENSMUST00000122557 93 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.59□□□□□ -2
Scn1aA2APX8 Gm16569-201ENSMUST00000160526 314 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm5929-201ENSMUST00000166883 487 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.59□□□□□ -2
Scn1aA2APX8 Mir3103-201ENSMUST00000175474 67 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm24417-201ENSMUST00000178123 79 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm24653-201ENSMUST00000178541 79 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm25934-201ENSMUST00000178642 79 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.59□□□□□ -2
Scn1aA2APX8 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.59□□□□□ -2
Scn1aA2APX8 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC2.59□□□□□ -2
Scn1aA2APX8 Gm10925-201ENSMUST00000189941 678 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.59□□□□□ -2
Scn1aA2APX8 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm42474-201ENSMUST00000201073 505 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.59□□□□□ -2
Scn1aA2APX8 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Scn1aA2APX8 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 AC154692.1-201ENSMUST00000228314 544 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Gm6462-201ENSMUST00000081488 304 ntBASIC2.59□□□□□ -2
Scn1aA2APX8 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Scn1aA2APX8 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Scn1aA2APX8 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn1aA2APX8 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Scn1aA2APX8 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn1aA2APX8 Gm15126-201ENSMUST00000118631 833 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scn1aA2APX8 Gm14848-201ENSMUST00000121850 467 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Gm13131-201ENSMUST00000122228 321 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn1aA2APX8 Gm22534-201ENSMUST00000158173 104 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Gm3025-201ENSMUST00000163454 489 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Gm2878-201ENSMUST00000170173 486 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.58□□□□□ -2
Scn1aA2APX8 Gm7443-201ENSMUST00000206355 378 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC2.58□□□□□ -2
Scn1aA2APX8 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC2.58□□□□□ -2
Scn1aA2APX8 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.58□□□□□ -2
Scn1aA2APX8 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn1aA2APX8 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scn1aA2APX8 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scn1aA2APX8 Gm22674-201ENSMUST00000104413 131 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Gm12954-201ENSMUST00000118610 611 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Gm12587-201ENSMUST00000120180 427 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Scn1aA2APX8 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn1aA2APX8 Gm43669-201ENSMUST00000198229 436 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Gm44348-201ENSMUST00000200165 122 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Gm45105-201ENSMUST00000207824 397 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Gm9373-201ENSMUST00000208724 599 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.58□□□□□ -2
Scn1aA2APX8 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scn1aA2APX8 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn1aA2APX8 Gm23102-201ENSMUST00000083724 116 ntBASIC2.58□□□□□ -2
Scn1aA2APX8 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Scn1aA2APX8 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.57□□□□□ -2
Scn1aA2APX8 Gm16383-201ENSMUST00000118122 232 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC2.57□□□□□ -2
Scn1aA2APX8 Gm25555-201ENSMUST00000158078 111 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 Gm23819-201ENSMUST00000158744 109 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 Gm16236-201ENSMUST00000159588 379 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.57□□□□□ -2
Scn1aA2APX8 Gm7897-201ENSMUST00000193981 554 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.57□□□□□ -2
Scn1aA2APX8 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 Gm20039-201ENSMUST00000210329 394 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 Gm7530-201ENSMUST00000218466 605 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Scn1aA2APX8 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.57□□□□□ -2
Scn1aA2APX8 Mir350-201ENSMUST00000083639 99 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 Olfr203-201ENSMUST00000089305 924 ntBASIC2.57□□□□□ -2
Scn1aA2APX8 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC2.56□□□□□ -2
Scn1aA2APX8 Gm16400-201ENSMUST00000116523 1029 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm9850-201ENSMUST00000117916 227 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm12372-201ENSMUST00000121654 768 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm12956-201ENSMUST00000122184 414 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm8580-201ENSMUST00000160295 464 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Mir3075-201ENSMUST00000175340 85 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm25412-201ENSMUST00000180258 107 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Gm3933-201ENSMUST00000195391 439 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Scn1aA2APX8 Gm45344-201ENSMUST00000211610 341 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.56□□□□□ -2
Scn1aA2APX8 AC154257.2-201ENSMUST00000224166 340 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn1aA2APX8 Gm23447-201ENSMUST00000082798 163 ntBASIC2.56□□□□□ -2
Scn1aA2APX8 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms