Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm14411-201ENSMUST00000121798 914 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm22986-201ENSMUST00000122753 130 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm25391-201ENSMUST00000157342 134 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm24240-201ENSMUST00000157785 135 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm16236-201ENSMUST00000159588 379 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm17183-201ENSMUST00000171170 493 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm24925-201ENSMUST00000178157 107 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm27342-201ENSMUST00000183530 109 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Mir8096-201ENSMUST00000184526 127 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm18448-201ENSMUST00000186286 599 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm18667-201ENSMUST00000186523 484 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm28647-201ENSMUST00000188416 197 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm37616-201ENSMUST00000193974 322 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm2189-201ENSMUST00000201419 429 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm23297-201ENSMUST00000083184 127 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Igkv11-106-201ENSMUST00000103331 346 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm8569-201ENSMUST00000117630 647 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm11490-201ENSMUST00000118128 272 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm14940-201ENSMUST00000119309 495 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm13239-201ENSMUST00000119920 637 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm14562-201ENSMUST00000129885 543 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm22560-201ENSMUST00000157332 120 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm24959-201ENSMUST00000157924 146 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm24213-201ENSMUST00000158255 258 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm22858-201ENSMUST00000174972 76 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm23799-201ENSMUST00000175559 120 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Mir6402-201ENSMUST00000183406 80 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm27470-201ENSMUST00000184070 210 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm6801-201ENSMUST00000190697 339 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm29192-201ENSMUST00000190942 377 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm37708-201ENSMUST00000192337 895 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm18414-201ENSMUST00000210858 694 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm19987-201ENSMUST00000216339 499 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm46233-201ENSMUST00000217831 449 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 AC121898.1-201ENSMUST00000227599 288 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm25202-201ENSMUST00000082838 191 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm22575-201ENSMUST00000082981 110 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.13□□□□□ -2.07
Trav11A0A0B4J1J9 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm25169-201ENSMUST00000104190 129 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm23530-201ENSMUST00000104564 137 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm14448-201ENSMUST00000116383 210 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm22072-201ENSMUST00000116850 121 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm15783-201ENSMUST00000117521 633 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm14915-201ENSMUST00000120747 204 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm22755-201ENSMUST00000157143 100 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm22794-201ENSMUST00000157228 306 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm22722-201ENSMUST00000157467 132 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm22833-201ENSMUST00000158292 132 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm3104-201ENSMUST00000171004 473 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav11A0A0B4J1J9 Gm8676-201ENSMUST00000184206 637 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms