Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm24910-201ENSMUST00000157289 272 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm20415-201ENSMUST00000172877 423 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm7398-201ENSMUST00000178589 639 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm7375-201ENSMUST00000179232 639 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm3681-201ENSMUST00000179940 639 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Mir7j-201ENSMUST00000184427 122 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Mir3620-201ENSMUST00000184710 61 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm29408-201ENSMUST00000187536 216 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm37239-201ENSMUST00000193510 141 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm42832-201ENSMUST00000196361 745 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm44076-201ENSMUST00000203072 520 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm43954-201ENSMUST00000204634 544 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm44128-201ENSMUST00000204909 219 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm45192-201ENSMUST00000206749 283 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm10042-201ENSMUST00000079884 78 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 AC134917.1-201ENSMUST00000220517 1449 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm26384-201ENSMUST00000102183 110 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm24855-201ENSMUST00000104848 97 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm15399-201ENSMUST00000118055 724 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm15113-201ENSMUST00000119280 836 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm12891-201ENSMUST00000119358 240 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm14887-201ENSMUST00000119522 663 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm11438-201ENSMUST00000121582 189 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm12770-201ENSMUST00000121734 462 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm5963-201ENSMUST00000143451 236 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm25058-201ENSMUST00000157365 128 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm22766-201ENSMUST00000158372 99 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm25451-201ENSMUST00000177832 121 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm27189-201ENSMUST00000184119 190 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm28030-201ENSMUST00000184987 138 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Trbv22-201ENSMUST00000191697 291 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm43043-201ENSMUST00000196579 412 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm19243-201ENSMUST00000198592 269 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm44016-201ENSMUST00000203463 164 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm18903-201ENSMUST00000215343 480 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
H2afb1S4R1E0 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm24951-201ENSMUST00000102182 109 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm23948-201ENSMUST00000104030 132 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm14810-201ENSMUST00000121628 486 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm26276-201ENSMUST00000157099 109 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm22733-201ENSMUST00000158094 91 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.13□□□□□ -1.91
H2afb1S4R1E0 Gm18185-201ENSMUST00000186725 667 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms