Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm25560-201ENSMUST00000104606 176 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm12509-201ENSMUST00000118033 609 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm22794-201ENSMUST00000157228 306 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm23600-201ENSMUST00000157260 71 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm23223-201ENSMUST00000158119 127 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm16232-201ENSMUST00000162856 167 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Mir3473a-201ENSMUST00000175011 78 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm6060-201ENSMUST00000188671 251 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm24350-202ENSMUST00000198309 132 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm18855-201ENSMUST00000206689 570 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm45687-201ENSMUST00000209454 155 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm9370-201ENSMUST00000222787 609 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.07□□□□□ -2.08
Trem3Q9JKE1 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm15106-201ENSMUST00000119691 821 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm14589-201ENSMUST00000121640 727 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm25979-201ENSMUST00000157177 138 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm22141-201ENSMUST00000157403 277 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm24291-201ENSMUST00000157633 162 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm15508-201ENSMUST00000160330 325 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm28623-201ENSMUST00000187219 192 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm43405-201ENSMUST00000198642 337 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm42516-201ENSMUST00000198691 767 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm43345-201ENSMUST00000199484 269 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm43992-201ENSMUST00000204358 197 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gm45678-201ENSMUST00000210509 295 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.06□□□□□ -2.08
Trem3Q9JKE1 AC156952.1-201ENSMUST00000220361 793 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Gnrh1-202ENSMUST00000223929 428 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.06□□□□□ -2.08
Trem3Q9JKE1 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm12891-201ENSMUST00000119358 240 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm11708-201ENSMUST00000119530 832 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm14101-201ENSMUST00000121502 473 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm12693-201ENSMUST00000121965 483 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm23980-201ENSMUST00000157135 158 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm22600-201ENSMUST00000157598 269 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm28358-202ENSMUST00000189292 223 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm20811-201ENSMUST00000190500 553 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm43669-201ENSMUST00000198229 436 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm45048-201ENSMUST00000207058 429 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 AC158142.3-201ENSMUST00000226230 675 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm9174-201ENSMUST00000078149 255 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm25856-201ENSMUST00000082786 75 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trem3Q9JKE1 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm24142-201ENSMUST00000101960 107 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms